Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30891.Seq
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M60854-1|AAA60583.1|  146|Homo sapiens RPS16 protein.                 215   7e-56
BC007977-1|AAH07977.1|  146|Homo sapiens ribosomal protein S16 p...   215   7e-56
BC004324-1|AAH04324.1|  146|Homo sapiens ribosomal protein S16 p...   215   7e-56
AB061841-1|BAB79479.1|  146|Homo sapiens ribosomal protein S16 p...   215   7e-56
BC071674-1|AAH71674.1|  152|Homo sapiens RPS16 protein protein.       128   1e-29
AK097937-1|BAC85106.1|  178|Homo sapiens protein ( Homo sapiens ...    93   4e-19
AL589739-1|CAI22504.1|  497|Homo sapiens novel protein protein.        30   5.1  
AL513477-6|CAI22608.1|  497|Homo sapiens novel protein protein.        30   5.1  
AK024003-1|BAB14768.1|  497|Homo sapiens protein ( Homo sapiens ...    30   5.1  

>M60854-1|AAA60583.1|  146|Homo sapiens RPS16 protein.
          Length = 146

 Score =  215 bits (525), Expect = 7e-56
 Identities = 99/143 (69%), Positives = 119/143 (83%)
 Frame = +1

Query: 7   RXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPXDLVXPRLLQYKLXEPILLLGKEKF 186
           + P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRP +++ PR LQYKL EP+LLLGKE+F
Sbjct: 4   KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERF 63

Query: 187 SXVXIRVTVKGXGHVAQVYAIRQLFQRL*FAFYQKYVDEASKKGIKDILVPYDRSXLVAX 366
           + V IRV VKG GHVAQ+YAIRQ   +   A+YQKYVDEASKK IKDIL+ YDR+ LVA 
Sbjct: 64  AGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVAD 123

Query: 367 PXRCEPQKFGGPGAXARXQKSXR 435
           P RCE +KFGGPGA AR QKS R
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146


>BC007977-1|AAH07977.1|  146|Homo sapiens ribosomal protein S16
           protein.
          Length = 146

 Score =  215 bits (525), Expect = 7e-56
 Identities = 99/143 (69%), Positives = 119/143 (83%)
 Frame = +1

Query: 7   RXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPXDLVXPRLLQYKLXEPILLLGKEKF 186
           + P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRP +++ PR LQYKL EP+LLLGKE+F
Sbjct: 4   KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERF 63

Query: 187 SXVXIRVTVKGXGHVAQVYAIRQLFQRL*FAFYQKYVDEASKKGIKDILVPYDRSXLVAX 366
           + V IRV VKG GHVAQ+YAIRQ   +   A+YQKYVDEASKK IKDIL+ YDR+ LVA 
Sbjct: 64  AGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVAD 123

Query: 367 PXRCEPQKFGGPGAXARXQKSXR 435
           P RCE +KFGGPGA AR QKS R
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146


>BC004324-1|AAH04324.1|  146|Homo sapiens ribosomal protein S16
           protein.
          Length = 146

 Score =  215 bits (525), Expect = 7e-56
 Identities = 99/143 (69%), Positives = 119/143 (83%)
 Frame = +1

Query: 7   RXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPXDLVXPRLLQYKLXEPILLLGKEKF 186
           + P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRP +++ PR LQYKL EP+LLLGKE+F
Sbjct: 4   KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERF 63

Query: 187 SXVXIRVTVKGXGHVAQVYAIRQLFQRL*FAFYQKYVDEASKKGIKDILVPYDRSXLVAX 366
           + V IRV VKG GHVAQ+YAIRQ   +   A+YQKYVDEASKK IKDIL+ YDR+ LVA 
Sbjct: 64  AGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVAD 123

Query: 367 PXRCEPQKFGGPGAXARXQKSXR 435
           P RCE +KFGGPGA AR QKS R
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146


>AB061841-1|BAB79479.1|  146|Homo sapiens ribosomal protein S16
           protein.
          Length = 146

 Score =  215 bits (525), Expect = 7e-56
 Identities = 99/143 (69%), Positives = 119/143 (83%)
 Frame = +1

Query: 7   RXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPXDLVXPRLLQYKLXEPILLLGKEKF 186
           + P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRP +++ PR LQYKL EP+LLLGKE+F
Sbjct: 4   KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERF 63

Query: 187 SXVXIRVTVKGXGHVAQVYAIRQLFQRL*FAFYQKYVDEASKKGIKDILVPYDRSXLVAX 366
           + V IRV VKG GHVAQ+YAIRQ   +   A+YQKYVDEASKK IKDIL+ YDR+ LVA 
Sbjct: 64  AGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVAD 123

Query: 367 PXRCEPQKFGGPGAXARXQKSXR 435
           P RCE +KFGGPGA AR QKS R
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146


>BC071674-1|AAH71674.1|  152|Homo sapiens RPS16 protein protein.
          Length = 152

 Score =  128 bits (308), Expect = 1e-29
 Identities = 56/83 (67%), Positives = 71/83 (85%)
 Frame = +1

Query: 7   RXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPXDLVXPRLLQYKLXEPILLLGKEKF 186
           + P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRP +++ PR LQYKL EP+LLLGKE+F
Sbjct: 4   KGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERF 63

Query: 187 SXVXIRVTVKGXGHVAQVYAIRQ 255
           + V IRV VKG GHVAQ+Y   Q
Sbjct: 64  AGVDIRVRVKGGGHVAQIYGESQ 86


>AK097937-1|BAC85106.1|  178|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40618 fis, clone THYMU2013089, moderately
           similar to 40S RIBOSOMAL PROTEIN S16. ).
          Length = 178

 Score = 93.5 bits (222), Expect = 4e-19
 Identities = 49/106 (46%), Positives = 67/106 (63%)
 Frame = +1

Query: 16  IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPXDLVXPRLLQYKLXEPILLLGKEKFSXV 195
           +Q+VQ+F  K+ A AV  C+ G G +R+N  P +++    LQYKL E  LLL KE+ + +
Sbjct: 18  LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77

Query: 196 XIRVTVKGXGHVAQVYAIRQLFQRL*FAFYQKYVDEASKKGIKDIL 333
            I V VKG GHV Q+YA+ Q   +     Y KYVDEAS++ IKD L
Sbjct: 78  DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEE-IKDTL 122


>AL589739-1|CAI22504.1|  497|Homo sapiens novel protein protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1

Query: 478 PPGXYHPMVFXEGFNGKISGIWXGHLDHRTSGARSXAXQPPXNS 347
           PP  YHP +F +  + K  G   G L  R  G    A +PP  S
Sbjct: 375 PPPGYHPFLFLDSLHKKAGGRSRGGLHPR--GTPPTAQEPPGGS 416


>AL513477-6|CAI22608.1|  497|Homo sapiens novel protein protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1

Query: 478 PPGXYHPMVFXEGFNGKISGIWXGHLDHRTSGARSXAXQPPXNS 347
           PP  YHP +F +  + K  G   G L  R  G    A +PP  S
Sbjct: 375 PPPGYHPFLFLDSLHKKAGGRSRGGLHPR--GTPPTAQEPPGGS 416


>AK024003-1|BAB14768.1|  497|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13941 fis, clone Y79AA1000850. ).
          Length = 497

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1

Query: 478 PPGXYHPMVFXEGFNGKISGIWXGHLDHRTSGARSXAXQPPXNS 347
           PP  YHP +F +  + K  G   G L  R  G    A +PP  S
Sbjct: 375 PPPGYHPFLFLDSLHKKAGGRSRGGLHPR--GTPPTAQEPPGGS 416


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,506,641
Number of Sequences: 237096
Number of extensions: 1199445
Number of successful extensions: 2345
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2345
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)