Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30891.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   223   1e-58
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   223   1e-58

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  223 bits (545), Expect = 1e-58
 Identities = 105/144 (72%), Positives = 119/144 (82%)
 Frame = +1

Query: 4   RRXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPXDLVXPRLLQYKLXEPILLLGKEK 183
           RR P+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRP + + P++LQYKL EP+LLLGKEK
Sbjct: 5   RREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEK 64

Query: 184 FSXVXIRVTVKGXGHVAQVYAIRQLFQRL*FAFYQKYVDEASKKGIKDILVPYDRSXLVA 363
           F+ V IRV V G GHVAQ+YAIRQ   +   AFYQKYVDEASKK IKDILV YDR+ LV 
Sbjct: 65  FAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVG 124

Query: 364 XPXRCEPQKFGGPGAXARXQKSXR 435
            P RCEP+KFGGPGA AR QKS R
Sbjct: 125 DPRRCEPKKFGGPGARARYQKSYR 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  223 bits (545), Expect = 1e-58
 Identities = 105/144 (72%), Positives = 119/144 (82%)
 Frame = +1

Query: 4   RRXPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPXDLVXPRLLQYKLXEPILLLGKEK 183
           RR P+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRP + + P++LQYKL EP+LLLGKEK
Sbjct: 5   RREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGKEK 64

Query: 184 FSXVXIRVTVKGXGHVAQVYAIRQLFQRL*FAFYQKYVDEASKKGIKDILVPYDRSXLVA 363
           F+ V IRV V G GHVAQ+YAIRQ   +   AFYQKYVDEASKK IKDILV YDR+ LV 
Sbjct: 65  FAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTLLVG 124

Query: 364 XPXRCEPQKFGGPGAXARXQKSXR 435
            P RCEP+KFGGPGA AR QKS R
Sbjct: 125 DPRRCEPKKFGGPGARARYQKSYR 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,034,497
Number of Sequences: 53049
Number of extensions: 336020
Number of successful extensions: 641
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)