Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30888.Seq
(447 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113508-1|AAM29513.1| 124|Drosophila melanogaster RE59131p pro... 73 1e-13
AE013599-889|AAM71074.1| 124|Drosophila melanogaster CG1821-PC,... 73 1e-13
AE013599-888|AAF58920.1| 124|Drosophila melanogaster CG1821-PB,... 73 1e-13
AE013599-887|AAM71073.1| 124|Drosophila melanogaster CG1821-PA,... 73 1e-13
AY069398-1|AAL39543.1| 587|Drosophila melanogaster LD10117p pro... 31 0.70
AE014134-3318|AAF53943.2| 592|Drosophila melanogaster CG9339-PC... 31 0.70
AE014134-3316|AAS64731.1| 587|Drosophila melanogaster CG9339-PH... 31 0.70
AE014134-3315|AAF53945.2| 587|Drosophila melanogaster CG9339-PB... 31 0.70
AE014134-3314|AAF53942.2| 587|Drosophila melanogaster CG9339-PA... 31 0.70
BT021428-1|AAX33576.1| 317|Drosophila melanogaster GM07807p pro... 27 8.7
AF174134-2|AAF88147.1| 293|Drosophila melanogaster unknown prot... 27 8.7
AE014298-2020|AAN09582.1| 317|Drosophila melanogaster CG32599-P... 27 8.7
>AY113508-1|AAM29513.1| 124|Drosophila melanogaster RE59131p
protein.
Length = 124
Score = 73.3 bits (172), Expect = 1e-13
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +2
Query: 53 MAKPKGERKGKSAINELLPVNIQLIYTNDFMVLXLKKRAPRAIKEIRKFAEKQMGNPDIR 232
M K KGE+ KSAINE++ + + KKRAPRAIKEIRKFAE++MG D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 233 *NS-LKQILWSKGVXNVP 283
++ L + +WSKG+ + P
Sbjct: 61 IDTRLNKHIWSKGIRSTP 78
Score = 66.5 bits (155), Expect = 2e-11
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Frame = +1
Query: 100 VVTREYTVNLHKRLHGVGFKKACPKSNQRNPKVR*KTDGESGHSIELA*TNSL-V*GSXK 276
VVTRE T++L KR+H +GFKK P++ + K + G + I+ + G
Sbjct: 17 VVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRS 76
Query: 277 CSLSVSV*GFXRRRNDDXDSAXXLFTLVTYVPVASIKGLQTXMLMAS 417
+ V RRRNDD DS L+T VTYVPV++ K LQT + +S
Sbjct: 77 TPFRIRV-RLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESS 122
>AE013599-889|AAM71074.1| 124|Drosophila melanogaster CG1821-PC,
isoform C protein.
Length = 124
Score = 73.3 bits (172), Expect = 1e-13
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +2
Query: 53 MAKPKGERKGKSAINELLPVNIQLIYTNDFMVLXLKKRAPRAIKEIRKFAEKQMGNPDIR 232
M K KGE+ KSAINE++ + + KKRAPRAIKEIRKFAE++MG D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 233 *NS-LKQILWSKGVXNVP 283
++ L + +WSKG+ + P
Sbjct: 61 IDTRLNKHIWSKGIRSTP 78
Score = 66.5 bits (155), Expect = 2e-11
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Frame = +1
Query: 100 VVTREYTVNLHKRLHGVGFKKACPKSNQRNPKVR*KTDGESGHSIELA*TNSL-V*GSXK 276
VVTRE T++L KR+H +GFKK P++ + K + G + I+ + G
Sbjct: 17 VVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRS 76
Query: 277 CSLSVSV*GFXRRRNDDXDSAXXLFTLVTYVPVASIKGLQTXMLMAS 417
+ V RRRNDD DS L+T VTYVPV++ K LQT + +S
Sbjct: 77 TPFRIRV-RLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESS 122
>AE013599-888|AAF58920.1| 124|Drosophila melanogaster CG1821-PB,
isoform B protein.
Length = 124
Score = 73.3 bits (172), Expect = 1e-13
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +2
Query: 53 MAKPKGERKGKSAINELLPVNIQLIYTNDFMVLXLKKRAPRAIKEIRKFAEKQMGNPDIR 232
M K KGE+ KSAINE++ + + KKRAPRAIKEIRKFAE++MG D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 233 *NS-LKQILWSKGVXNVP 283
++ L + +WSKG+ + P
Sbjct: 61 IDTRLNKHIWSKGIRSTP 78
Score = 66.5 bits (155), Expect = 2e-11
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Frame = +1
Query: 100 VVTREYTVNLHKRLHGVGFKKACPKSNQRNPKVR*KTDGESGHSIELA*TNSL-V*GSXK 276
VVTRE T++L KR+H +GFKK P++ + K + G + I+ + G
Sbjct: 17 VVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRS 76
Query: 277 CSLSVSV*GFXRRRNDDXDSAXXLFTLVTYVPVASIKGLQTXMLMAS 417
+ V RRRNDD DS L+T VTYVPV++ K LQT + +S
Sbjct: 77 TPFRIRV-RLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESS 122
>AE013599-887|AAM71073.1| 124|Drosophila melanogaster CG1821-PA,
isoform A protein.
Length = 124
Score = 73.3 bits (172), Expect = 1e-13
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +2
Query: 53 MAKPKGERKGKSAINELLPVNIQLIYTNDFMVLXLKKRAPRAIKEIRKFAEKQMGNPDIR 232
M K KGE+ KSAINE++ + + KKRAPRAIKEIRKFAE++MG D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 233 *NS-LKQILWSKGVXNVP 283
++ L + +WSKG+ + P
Sbjct: 61 IDTRLNKHIWSKGIRSTP 78
Score = 66.5 bits (155), Expect = 2e-11
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Frame = +1
Query: 100 VVTREYTVNLHKRLHGVGFKKACPKSNQRNPKVR*KTDGESGHSIELA*TNSL-V*GSXK 276
VVTRE T++L KR+H +GFKK P++ + K + G + I+ + G
Sbjct: 17 VVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRS 76
Query: 277 CSLSVSV*GFXRRRNDDXDSAXXLFTLVTYVPVASIKGLQTXMLMAS 417
+ V RRRNDD DS L+T VTYVPV++ K LQT + +S
Sbjct: 77 TPFRIRV-RLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESS 122
>AY069398-1|AAL39543.1| 587|Drosophila melanogaster LD10117p
protein.
Length = 587
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 332 SXSSLRLR*KPHTDTXREHFXLP*TKEFV 246
S S + ++ HT T REHF LP TK F+
Sbjct: 378 SQSQVNIQMMSHTLTIREHFGLPGTKNFI 406
>AE014134-3318|AAF53943.2| 592|Drosophila melanogaster CG9339-PC,
isoform C protein.
Length = 592
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 332 SXSSLRLR*KPHTDTXREHFXLP*TKEFV 246
S S + ++ HT T REHF LP TK F+
Sbjct: 383 SQSQVNIQMMSHTLTIREHFGLPGTKNFI 411
>AE014134-3316|AAS64731.1| 587|Drosophila melanogaster CG9339-PH,
isoform H protein.
Length = 587
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 332 SXSSLRLR*KPHTDTXREHFXLP*TKEFV 246
S S + ++ HT T REHF LP TK F+
Sbjct: 378 SQSQVNIQMMSHTLTIREHFGLPGTKNFI 406
>AE014134-3315|AAF53945.2| 587|Drosophila melanogaster CG9339-PB,
isoform B protein.
Length = 587
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 332 SXSSLRLR*KPHTDTXREHFXLP*TKEFV 246
S S + ++ HT T REHF LP TK F+
Sbjct: 378 SQSQVNIQMMSHTLTIREHFGLPGTKNFI 406
>AE014134-3314|AAF53942.2| 587|Drosophila melanogaster CG9339-PA,
isoform A protein.
Length = 587
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 332 SXSSLRLR*KPHTDTXREHFXLP*TKEFV 246
S S + ++ HT T REHF LP TK F+
Sbjct: 378 SQSQVNIQMMSHTLTIREHFGLPGTKNFI 406
>BT021428-1|AAX33576.1| 317|Drosophila melanogaster GM07807p
protein.
Length = 317
Score = 27.5 bits (58), Expect = 8.7
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 7 SSFSKLNSVHET*DNNG*TQR*KKRQISHK-RVVTR-EYTVNLHKRLH--GVGFKKACPK 174
S+ S L+ V+E N G R K+R+ HK R V R ++ H+R H +G + PK
Sbjct: 175 SASSSLHYVNELLPNGGGEHRKKQRRHRHKERSVERDDHHQRSHQRSHTPDIGVHRGAPK 234
Query: 175 SNQRNPKVR*KTDGESGHSIEL 240
P R K G++ ++L
Sbjct: 235 ----RPSFRQKLFGQTIAHVKL 252
>AF174134-2|AAF88147.1| 293|Drosophila melanogaster unknown protein
protein.
Length = 293
Score = 27.5 bits (58), Expect = 8.7
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 7 SSFSKLNSVHET*DNNG*TQR*KKRQISHK-RVVTR-EYTVNLHKRLH--GVGFKKACPK 174
S+ S L+ V+E N G R K+R+ HK R V R ++ H+R H +G + PK
Sbjct: 151 SASSSLHYVNELLPNGGGEHRKKQRRHRHKERSVERDDHHQRSHQRSHTPDIGVHRGAPK 210
Query: 175 SNQRNPKVR*KTDGESGHSIEL 240
P R K G++ ++L
Sbjct: 211 ----RPSFRQKLFGQTIAHVKL 228
>AE014298-2020|AAN09582.1| 317|Drosophila melanogaster CG32599-PA
protein.
Length = 317
Score = 27.5 bits (58), Expect = 8.7
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 7 SSFSKLNSVHET*DNNG*TQR*KKRQISHK-RVVTR-EYTVNLHKRLH--GVGFKKACPK 174
S+ S L+ V+E N G R K+R+ HK R V R ++ H+R H +G + PK
Sbjct: 175 SASSSLHYVNELLPNGGGEHRKKQRRHRHKERSVERDDHHQRSHQRSHTPDIGVHRGAPK 234
Query: 175 SNQRNPKVR*KTDGESGHSIEL 240
P R K G++ ++L
Sbjct: 235 ----RPSFRQKLFGQTIAHVKL 252
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,379,012
Number of Sequences: 53049
Number of extensions: 262807
Number of successful extensions: 518
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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