Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30883.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   2.9  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   3.8  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    23   5.0  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 253 KLMSRYNQCNQVQQCRNPTILCIQGIS 173
           +L+ +YNQ +Q  QC    +L   G S
Sbjct: 360 ELLRKYNQSSQGSQCNQAIMLITDGPS 386


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 4   PKLSLCGLVLSVWGIIQLTLMGRLLLY 84
           PK+ + G+VL+V  ++ L  M  LLL+
Sbjct: 764 PKVFMLGIVLAVIAVVVLIGMAVLLLW 790


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 359 VAICNYVCN*VVVLSIDNIGKHS*LHXTPTIKNI 460
           V +C YVCN  V+    +IG H  L+   TI+ +
Sbjct: 197 VVMCGYVCNLKVMTICCSIG-HCTLYTRMTIEMV 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,570
Number of Sequences: 2352
Number of extensions: 11132
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)