Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30883.Seq
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118852-1|AAM50712.1|   95|Drosophila melanogaster GM16138p pro...    73   3e-13
AE013599-7|EAA46159.1|   95|Drosophila melanogaster CG40127-PA p...    73   3e-13
AE013599-3344|AAF46807.1|  107|Drosophila melanogaster CG11269-P...    34   0.15 

>AY118852-1|AAM50712.1|   95|Drosophila melanogaster GM16138p
           protein.
          Length = 95

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 31/61 (50%), Positives = 44/61 (72%)
 Frame = +2

Query: 71  VFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYTLNAQNCWIAALLYLITLVVSGHQ 250
           +F+YI +VAL+EDLP +E+   HS+EDF     + Y  NA NCWIAA +Y++TL++S  Q
Sbjct: 28  LFFYINSVALIEDLPLEEEY--HSLEDFYAAANRAYNQNAYNCWIAACIYVLTLLLSAQQ 85

Query: 251 F 253
           F
Sbjct: 86  F 86



 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = +1

Query: 1  GPKLSLCGLVLSVWGIIQLTLMGRLLLYSS 90
          GPKLSLCGL++SVWGI+QL LMG     +S
Sbjct: 5  GPKLSLCGLIISVWGIVQLVLMGLFFYINS 34


>AE013599-7|EAA46159.1|   95|Drosophila melanogaster CG40127-PA
           protein.
          Length = 95

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 31/61 (50%), Positives = 44/61 (72%)
 Frame = +2

Query: 71  VFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYTLNAQNCWIAALLYLITLVVSGHQ 250
           +F+YI +VAL+EDLP +E+   HS+EDF     + Y  NA NCWIAA +Y++TL++S  Q
Sbjct: 28  LFFYINSVALIEDLPLEEEY--HSLEDFYAAANRAYNQNAYNCWIAACIYVLTLLLSAQQ 85

Query: 251 F 253
           F
Sbjct: 86  F 86



 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = +1

Query: 1  GPKLSLCGLVLSVWGIIQLTLMGRLLLYSS 90
          GPKLSLCGL++SVWGI+QL LMG     +S
Sbjct: 5  GPKLSLCGLIISVWGIVQLVLMGLFFYINS 34


>AE013599-3344|AAF46807.1|  107|Drosophila melanogaster CG11269-PA
           protein.
          Length = 107

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 17/51 (33%), Positives = 31/51 (60%)
 Frame = +2

Query: 71  VFYYIRAVALLEDLPFDEKNXPHSIEDFVIEVEKGYTLNAQNCWIAALLYL 223
           +F+Y++++ LLE LP    + P S E F  + ++ Y   +  C++AA+ YL
Sbjct: 27  IFFYVQSLMLLESLPLPH-HFP-SQEAFKEQADEAYQDVSTRCFVAAVFYL 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,110,321
Number of Sequences: 53049
Number of extensions: 449081
Number of successful extensions: 936
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)