Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30880.Seq
(417 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29 pro... 57 3e-08
U49083-1|AAC50647.1| 159|Homo sapiens HIP protein. 57 3e-08
U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29 pro... 57 3e-08
BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29 p... 57 3e-08
BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29 p... 57 3e-08
BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29 p... 57 3e-08
BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29 p... 57 3e-08
BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29 p... 57 3e-08
AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA seq... 57 3e-08
X75932-1|CAA53536.1| 603|Homo sapiens Serine/Threonine protein ... 33 0.29
X73458-1|CAA51837.1| 603|Homo sapiens protein kinase protein. 33 0.29
U01038-1|AAA56634.1| 603|Homo sapiens pLK protein. 33 0.29
L19559-1|AAA36659.1| 603|Homo sapiens protein kinase protein. 33 0.29
BC014846-1|AAH14846.1| 603|Homo sapiens polo-like kinase 1 (Dro... 33 0.29
BC003002-1|AAH03002.1| 603|Homo sapiens polo-like kinase 1 (Dro... 33 0.29
BC002369-1|AAH02369.1| 603|Homo sapiens polo-like kinase 1 (Dro... 33 0.29
AB209179-1|BAD92416.1| 546|Homo sapiens polo-like kinase varian... 33 0.29
AY221994-1|AAO43053.1| 1964|Homo sapiens heat shock regulated-1 ... 29 6.2
AL117428-1|CAB55917.1| 591|Homo sapiens hypothetical protein pr... 29 6.2
AK074130-1|BAB84956.1| 1457|Homo sapiens FLJ00203 protein protein. 29 6.2
AK023766-1|BAB14671.1| 892|Homo sapiens protein ( Homo sapiens ... 29 6.2
AB037831-1|BAA92648.2| 4355|Homo sapiens KIAA1410 protein protein. 29 6.2
>Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 56.8 bits (131), Expect = 3e-08
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHT HNQ+RK HRNGIKKPR R+E
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYE 30
Score = 35.1 bits (77), Expect = 0.095
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 263 GMDPKFLRNPRFCKKGNLKPAKQL 334
G+DPKFLRN RF KK N K K++
Sbjct: 34 GVDPKFLRNMRFAKKHNKKGLKKM 57
>U49083-1|AAC50647.1| 159|Homo sapiens HIP protein.
Length = 159
Score = 56.8 bits (131), Expect = 3e-08
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHT HNQ+RK HRNGIKKPR R+E
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYE 30
Score = 35.1 bits (77), Expect = 0.095
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 263 GMDPKFLRNPRFCKKGNLKPAKQL 334
G+DPKFLRN RF KK N K K++
Sbjct: 34 GVDPKFLRNMRFAKKHNKKGLKKM 57
>U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 56.8 bits (131), Expect = 3e-08
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHT HNQ+RK HRNGIKKPR R+E
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYE 30
Score = 35.1 bits (77), Expect = 0.095
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 263 GMDPKFLRNPRFCKKGNLKPAKQL 334
G+DPKFLRN RF KK N K K++
Sbjct: 34 GVDPKFLRNMRFAKKHNKKGLKKM 57
>BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29
protein.
Length = 161
Score = 56.8 bits (131), Expect = 3e-08
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHT HNQ+RK HRNGIKKPR R+E
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYE 30
Score = 35.1 bits (77), Expect = 0.095
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 263 GMDPKFLRNPRFCKKGNLKPAKQL 334
G+DPKFLRN RF KK N K K++
Sbjct: 34 GVDPKFLRNMRFAKKHNKKGLKKM 57
>BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 56.8 bits (131), Expect = 3e-08
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHT HNQ+RK HRNGIKKPR R+E
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYE 30
Score = 35.1 bits (77), Expect = 0.095
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 263 GMDPKFLRNPRFCKKGNLKPAKQL 334
G+DPKFLRN RF KK N K K++
Sbjct: 34 GVDPKFLRNMRFAKKHNKKGLKKM 57
>BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 56.8 bits (131), Expect = 3e-08
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHT HNQ+RK HRNGIKKPR R+E
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYE 30
Score = 35.1 bits (77), Expect = 0.095
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 263 GMDPKFLRNPRFCKKGNLKPAKQL 334
G+DPKFLRN RF KK N K K++
Sbjct: 34 GVDPKFLRNMRFAKKHNKKGLKKM 57
>BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 56.8 bits (131), Expect = 3e-08
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHT HNQ+RK HRNGIKKPR R+E
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYE 30
Score = 35.1 bits (77), Expect = 0.095
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 263 GMDPKFLRNPRFCKKGNLKPAKQL 334
G+DPKFLRN RF KK N K K++
Sbjct: 34 GVDPKFLRNMRFAKKHNKKGLKKM 57
>BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 56.8 bits (131), Expect = 3e-08
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHT HNQ+RK HRNGIKKPR R+E
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYE 30
Score = 35.1 bits (77), Expect = 0.095
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 263 GMDPKFLRNPRFCKKGNLKPAKQL 334
G+DPKFLRN RF KK N K K++
Sbjct: 34 GVDPKFLRNMRFAKKHNKKGLKKM 57
>AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA
sequence from clone RP11-632C17 on chromosome 6 Contains
the gene for a novel protein similar to ribosomal
protein L29 ).
Length = 172
Score = 56.8 bits (131), Expect = 3e-08
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 254
MAKSKNHT HNQ+RK HRNGIKKPR R+E
Sbjct: 16 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYE 45
Score = 35.1 bits (77), Expect = 0.095
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 263 GMDPKFLRNPRFCKKGNLKPAKQL 334
G+DPKFLRN RF KK N K K++
Sbjct: 49 GVDPKFLRNMRFAKKHNKKGLKKM 72
>X75932-1|CAA53536.1| 603|Homo sapiens Serine/Threonine protein
kinase protein.
Length = 603
Score = 33.5 bits (73), Expect = 0.29
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 254 TTLGMDPKFLRNPRFCKKGNLKPAKQLAKAAERKLPEKPRPRNE 385
T L + P+F P N KP L K E LPE+PR + E
Sbjct: 317 TCLTIPPRFSIAPSSLDPSNRKPLTVLNKGLENPLPERPREKEE 360
>X73458-1|CAA51837.1| 603|Homo sapiens protein kinase protein.
Length = 603
Score = 33.5 bits (73), Expect = 0.29
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 254 TTLGMDPKFLRNPRFCKKGNLKPAKQLAKAAERKLPEKPRPRNE 385
T L + P+F P N KP L K E LPE+PR + E
Sbjct: 317 TCLTIPPRFSIAPSSLDPSNRKPLTVLNKGLENPLPERPREKEE 360
>U01038-1|AAA56634.1| 603|Homo sapiens pLK protein.
Length = 603
Score = 33.5 bits (73), Expect = 0.29
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 254 TTLGMDPKFLRNPRFCKKGNLKPAKQLAKAAERKLPEKPRPRNE 385
T L + P+F P N KP L K E LPE+PR + E
Sbjct: 317 TCLTIPPRFSIAPSSLDPSNRKPLTVLNKGLENPLPERPREKEE 360
>L19559-1|AAA36659.1| 603|Homo sapiens protein kinase protein.
Length = 603
Score = 33.5 bits (73), Expect = 0.29
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 254 TTLGMDPKFLRNPRFCKKGNLKPAKQLAKAAERKLPEKPRPRNE 385
T L + P+F P N KP L K E LPE+PR + E
Sbjct: 317 TCLTIPPRFSIAPSSLDPSNRKPLTVLNKGLENPLPERPREKEE 360
>BC014846-1|AAH14846.1| 603|Homo sapiens polo-like kinase 1
(Drosophila) protein.
Length = 603
Score = 33.5 bits (73), Expect = 0.29
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 254 TTLGMDPKFLRNPRFCKKGNLKPAKQLAKAAERKLPEKPRPRNE 385
T L + P+F P N KP L K E LPE+PR + E
Sbjct: 317 TCLTIPPRFSIAPSSLDPSNRKPLTVLNKGLENPLPERPREKEE 360
>BC003002-1|AAH03002.1| 603|Homo sapiens polo-like kinase 1
(Drosophila) protein.
Length = 603
Score = 33.5 bits (73), Expect = 0.29
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 254 TTLGMDPKFLRNPRFCKKGNLKPAKQLAKAAERKLPEKPRPRNE 385
T L + P+F P N KP L K E LPE+PR + E
Sbjct: 317 TCLTIPPRFSIAPSSLDPSNRKPLTVLNKGLENPLPERPREKEE 360
>BC002369-1|AAH02369.1| 603|Homo sapiens polo-like kinase 1
(Drosophila) protein.
Length = 603
Score = 33.5 bits (73), Expect = 0.29
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 254 TTLGMDPKFLRNPRFCKKGNLKPAKQLAKAAERKLPEKPRPRNE 385
T L + P+F P N KP L K E LPE+PR + E
Sbjct: 317 TCLTIPPRFSIAPSSLDPSNRKPLTVLNKGLENPLPERPREKEE 360
>AB209179-1|BAD92416.1| 546|Homo sapiens polo-like kinase variant
protein.
Length = 546
Score = 33.5 bits (73), Expect = 0.29
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 254 TTLGMDPKFLRNPRFCKKGNLKPAKQLAKAAERKLPEKPRPRNE 385
T L + P+F P N KP L K E LPE+PR + E
Sbjct: 260 TCLTIPPRFSIAPSSLDPSNRKPLTVLNKGLENPLPERPREKEE 303
>AY221994-1|AAO43053.1| 1964|Homo sapiens heat shock regulated-1
protein.
Length = 1964
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = -2
Query: 326 WLASGYPSCKTLDS-----LKILDPCQGWFVPGLPWLF 228
W A YPS K L S L+ LD Q W G+P +F
Sbjct: 1843 WSAKAYPSLKPLSSWVMDLLQRLDFLQAWIQDGIPAVF 1880
>AL117428-1|CAB55917.1| 591|Homo sapiens hypothetical protein
protein.
Length = 591
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = -2
Query: 326 WLASGYPSCKTLDS-----LKILDPCQGWFVPGLPWLF 228
W A YPS K L S L+ LD Q W G+P +F
Sbjct: 401 WSAKAYPSLKPLSSWVMDLLQRLDFLQAWIQDGIPAVF 438
>AK074130-1|BAB84956.1| 1457|Homo sapiens FLJ00203 protein protein.
Length = 1457
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = -2
Query: 326 WLASGYPSCKTLDS-----LKILDPCQGWFVPGLPWLF 228
W A YPS K L S L+ LD Q W G+P +F
Sbjct: 1336 WSAKAYPSLKPLSSWVMDLLQRLDFLQAWIQDGIPAVF 1373
>AK023766-1|BAB14671.1| 892|Homo sapiens protein ( Homo sapiens
cDNA FLJ13704 fis, clone PLACE2000274, weakly similar to
DYNEIN BETA CHAIN, CILIARY. ).
Length = 892
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = -2
Query: 326 WLASGYPSCKTLDS-----LKILDPCQGWFVPGLPWLF 228
W A YPS K L S L+ LD Q W G+P +F
Sbjct: 829 WSAKAYPSLKPLSSWVMDLLQRLDFLQAWIQDGIPAVF 866
>AB037831-1|BAA92648.2| 4355|Homo sapiens KIAA1410 protein protein.
Length = 4355
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Frame = -2
Query: 326 WLASGYPSCKTLDS-----LKILDPCQGWFVPGLPWLF 228
W A YPS K L S L+ LD Q W G+P +F
Sbjct: 4165 WSAKAYPSLKPLSSWVMDLLQRLDFLQAWIQDGIPAVF 4202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,339,131
Number of Sequences: 237096
Number of extensions: 858674
Number of successful extensions: 2256
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2251
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -