Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30880.Seq
(417 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40226-1|AAB01760.1| 76|Drosophila melanogaster L43 protein. 66 1e-11
AE013599-3176|AAF46708.1| 76|Drosophila melanogaster CG10071-P... 66 1e-11
AE013599-3175|AAM70864.1| 76|Drosophila melanogaster CG10071-P... 66 1e-11
AE013599-3174|AAM70863.1| 76|Drosophila melanogaster CG10071-P... 66 1e-11
AY075553-1|AAL68360.1| 56|Drosophila melanogaster RH58777p pro... 63 2e-10
BT029671-1|ABL75728.1| 131|Drosophila melanogaster IP17325p pro... 27 7.6
AE014296-847|AAF47899.1| 604|Drosophila melanogaster CG15020-PA... 27 7.6
AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB... 27 10.0
AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA... 27 10.0
>U40226-1|AAB01760.1| 76|Drosophila melanogaster L43 protein.
Length = 76
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/59 (54%), Positives = 40/59 (67%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWIQNF*GIQGFARRVT*SQPSNSRR 341
MAKSKNHTNHNQN+KAHRNGIK+P + RHE L F Q +AR+ S+ + +R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVKR 59
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 254 TTLGMDPKFLRNPRFCKKGNLKPAKQLAKAAERKLPEKPRPR 379
+TLGMD KFL N R+ +KGNL + + + ER +K +P+
Sbjct: 31 STLGMDVKFLINQRYARKGNLSREESVKRYNERIASQKGKPK 72
>AE013599-3176|AAF46708.1| 76|Drosophila melanogaster CG10071-PC,
isoform C protein.
Length = 76
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/59 (54%), Positives = 40/59 (67%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWIQNF*GIQGFARRVT*SQPSNSRR 341
MAKSKNHTNHNQN+KAHRNGIK+P + RHE L F Q +AR+ S+ + +R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVKR 59
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 254 TTLGMDPKFLRNPRFCKKGNLKPAKQLAKAAERKLPEKPRPR 379
+TLGMD KFL N R+ +KGNL + + + ER +K +P+
Sbjct: 31 STLGMDVKFLINQRYARKGNLSREESVKRYNERIASQKGKPK 72
>AE013599-3175|AAM70864.1| 76|Drosophila melanogaster CG10071-PB,
isoform B protein.
Length = 76
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/59 (54%), Positives = 40/59 (67%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWIQNF*GIQGFARRVT*SQPSNSRR 341
MAKSKNHTNHNQN+KAHRNGIK+P + RHE L F Q +AR+ S+ + +R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVKR 59
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 254 TTLGMDPKFLRNPRFCKKGNLKPAKQLAKAAERKLPEKPRPR 379
+TLGMD KFL N R+ +KGNL + + + ER +K +P+
Sbjct: 31 STLGMDVKFLINQRYARKGNLSREESVKRYNERIASQKGKPK 72
>AE013599-3174|AAM70863.1| 76|Drosophila melanogaster CG10071-PA,
isoform A protein.
Length = 76
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/59 (54%), Positives = 40/59 (67%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWIQNF*GIQGFARRVT*SQPSNSRR 341
MAKSKNHTNHNQN+KAHRNGIK+P + RHE L F Q +AR+ S+ + +R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVKR 59
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 254 TTLGMDPKFLRNPRFCKKGNLKPAKQLAKAAERKLPEKPRPR 379
+TLGMD KFL N R+ +KGNL + + + ER +K +P+
Sbjct: 31 STLGMDVKFLINQRYARKGNLSREESVKRYNERIASQKGKPK 72
>AY075553-1|AAL68360.1| 56|Drosophila melanogaster RH58777p
protein.
Length = 56
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPL 263
MAKSKNHTNHNQN+KAHRNGIK+P + RHE L
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTL 33
>BT029671-1|ABL75728.1| 131|Drosophila melanogaster IP17325p
protein.
Length = 131
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 302 KKGNLKPAKQLAKAAERKLPEKPRPRN 382
+K L AK+ KAA RKL +K + RN
Sbjct: 99 RKARLNAAKRSKKAANRKLNKKSKNRN 125
>AE014296-847|AAF47899.1| 604|Drosophila melanogaster CG15020-PA
protein.
Length = 604
Score = 27.5 bits (58), Expect = 7.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 222 HFCELCGFGYDLYDSLTLPF 163
HF C +GYD + ++T PF
Sbjct: 313 HFKVTCEYGYDFWKTVTFPF 332
>AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB,
isoform B protein.
Length = 3313
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 174 SKNHTNHNQNRKAHRNG 224
SKN+ NHNQN+ NG
Sbjct: 544 SKNNNNHNQNQNVTANG 560
>AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA,
isoform A protein.
Length = 3313
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 174 SKNHTNHNQNRKAHRNG 224
SKN+ NHNQN+ NG
Sbjct: 544 SKNNNNHNQNQNVTANG 560
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,882,033
Number of Sequences: 53049
Number of extensions: 255023
Number of successful extensions: 1013
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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