Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30876.Seq
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 107 2e-22
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 105 7e-22
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 85 6e-16
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 67 2e-10
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 64 1e-09
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 60 2e-08
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 60 4e-08
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 59 5e-08
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 57 3e-07
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 55 8e-07
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 49 5e-05
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 45 0.001
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.095
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 36 0.67
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 35 0.88
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 33 3.6
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 107 bits (256), Expect = 2e-22
Identities = 49/77 (63%), Positives = 61/77 (79%)
Frame = +2
Query: 23 PIQAVQVFGRKKTATAVXYXKXGXGMXRVXGRPLDLVXPXLLQYKLQEPILLLGKEKFSM 202
P+Q+VQVFGRKKTATAV + K G G+ +V GRPL+++ P LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 203 VXIXXXVKGGGXVAQVY 253
V I VKGGG VAQ+Y
Sbjct: 66 VDIRVRVKGGGHVAQIY 82
Score = 60.5 bits (140), Expect = 2e-08
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +1
Query: 256 IRQAISKALIAFXQKYVXXASKKEIKDXLVQYDRSLL 366
IRQ+ISKAL+A+ QKYV ASKKEIKD L+QYDR+LL
Sbjct: 84 IRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLL 120
Score = 40.7 bits (91), Expect = 0.018
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +3
Query: 375 PASCEXKKFGGXXGRARYQKSYR 443
P CE KKFGG RARYQKSYR
Sbjct: 124 PRRCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 105 bits (251), Expect = 7e-22
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2
Query: 11 ARREPIQAVQVFGRKKTATAVXYXKXGXGMXRVXGRPLDLVXPXLLQYKLQEPILLLGKE 190
A +E IQ+VQV GRKKTATAV Y K G G+ +V GRPL+ + P L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 191 KFSMVXIXXXVKGGGXVAQVY 253
+F+ V I VKGGG VAQ+Y
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIY 84
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1
Query: 256 IRQAISKALIAFXQKYVXXASKKEIKDXLVQYDRSLL 366
IRQAISKAL+A+ QKYV SKKEIKD L+QYDR+LL
Sbjct: 86 IRQAISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLL 122
Score = 40.7 bits (91), Expect = 0.018
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +3
Query: 375 PASCEXKKFGGXXGRARYQKSYR 443
P CE KKFGG RARYQKSYR
Sbjct: 126 PRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 85.4 bits (202), Expect = 6e-16
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = +2
Query: 26 IQAVQVFGRKKTATAVXYXKXGXGMXRVXGRPLDLVXPXLLQYKLQEPILLLGKEKFSMV 205
+ +VQ FG+KK+ATAV + K G G+ +V G P+ LV P +L++K+ EP+LL+G +KFS +
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 206 XIXXXVKGGGXVAQVY 253
I V GGG V+QVY
Sbjct: 64 DIRVRVTGGGHVSQVY 79
Score = 46.4 bits (105), Expect = 4e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 256 IRQAISKALIAFXQKYVXXASKKEIKDXLVQYDRSLL 366
IRQAI+K L+A+ QKYV SK E+K YDR+LL
Sbjct: 81 IRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLL 117
Score = 32.3 bits (70), Expect = 6.2
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 387 EXKKFGGXXGRARYQKSYR 443
E KKFGG R+R+QKSYR
Sbjct: 125 EPKKFGGKGARSRFQKSYR 143
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 67.3 bits (157), Expect = 2e-10
Identities = 28/56 (50%), Positives = 44/56 (78%)
Frame = +2
Query: 32 AVQVFGRKKTATAVXYXKXGXGMXRVXGRPLDLVXPXLLQYKLQEPILLLGKEKFS 199
+V FG+KKTATAV + K G G+ R+ G+P+ LV P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
Score = 41.9 bits (94), Expect = 0.008
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 226 GWWSXSTSLRIRQAISKALIAFXQKYVXXASKKEIKDXLVQYDRSLL 366
G + S IRQAI+K+L+A+ KY AS E++ V YDR+LL
Sbjct: 127 GGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLL 173
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 64.5 bits (150), Expect = 1e-09
Identities = 33/90 (36%), Positives = 47/90 (52%)
Frame = +2
Query: 8 EARREPIQAVQVFGRKKTATAVXYXKXGXGMXRVXGRPLDLVXPXLLQYKLQEPILLLGK 187
E R V G+KK + AV + K G G V PL LV P +L+ K+ EPI++LG+
Sbjct: 16 EVRERDKYTVHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGE 75
Query: 188 EKFSMVXIXXXVKGGGXVAQVYVSDKLFQR 277
F + + V GGG V+Q+Y + R
Sbjct: 76 SLFKGLDMNIKVAGGGHVSQIYAVRQAISR 105
Score = 37.1 bits (82), Expect = 0.22
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +3
Query: 375 PASCEXKKFGGXXGRARYQKSYR 443
P CE KKFGG RAR QKSYR
Sbjct: 136 PRRCEAKKFGGRGARARRQKSYR 158
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 60.5 bits (140), Expect = 2e-08
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = +2
Query: 26 IQAVQVFGRKKTATAVXYXKXGXGMXRVXGRPLDLVXPXLLQYKLQEPILLLGKEKFSMV 205
+Q+VQ+F K+ A AV + G G R+ PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 206 XIXXXVKGGGXVAQVY 253
I VKG G V Q+Y
Sbjct: 78 DIHVRVKGSGHVVQIY 93
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 59.7 bits (138), Expect = 4e-08
Identities = 24/74 (32%), Positives = 47/74 (63%)
Frame = +2
Query: 26 IQAVQVFGRKKTATAVXYXKXGXGMXRVXGRPLDLVXPXLLQYKLQEPILLLGKEKFSMV 205
++ +Q G++KTA A + G G R+ G+P++++ P + ++ + EP++L G+E ++ V
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 206 XIXXXVKGGGXVAQ 247
I V+GGG + Q
Sbjct: 61 DIDVKVQGGGFMGQ 74
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 59.3 bits (137), Expect = 5e-08
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +2
Query: 35 VQVFGRKKTATAVXYXKXGXGMXRVXGRPLDLVXPXLLQYKLQEPILLLGKEKFSMVXIX 214
+Q FG+KK A A+ K G G ++ G P++LV P ++ K+ EP +LG + +
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 215 XXVKGGGXVAQVY 253
KGGG V+Q+Y
Sbjct: 63 IFSKGGGKVSQIY 75
Score = 34.3 bits (75), Expect = 1.5
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 220 SQGWWSXSTSLRIRQAISKALIAFXQKYVXXASKKEIKDXLVQYDRSLL 366
S+G S IRQ+ISK L+ + KY+ + +K + YD+ LL
Sbjct: 65 SKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLL 113
Score = 32.3 bits (70), Expect = 6.2
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 387 EXKKFGGXXGRARYQKSYR 443
E KK+GG RAR+QKSYR
Sbjct: 121 EPKKYGGLGARARFQKSYR 139
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 56.8 bits (131), Expect = 3e-07
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 23 PIQAVQVFGRKKTATAVXYXKXGXGMXRVXG-RPLDLVXPXLLQYKLQEPILLLGKEKFS 199
P+Q+ QVFG KK A A+ G + +V L++ P QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKAIAMH--AKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 200 MVXIXXXVKGGGXVAQVY 253
V I V G G VAQ+Y
Sbjct: 83 RVGIWVRVNGVGRVAQIY 100
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 55.2 bits (127), Expect = 8e-07
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 26 IQAVQVFGRKKTATAVX-YXKXGXGMXRVXGRPLDLVXPXLLQYKLQEPILLLGKEKFSM 202
++ VQ FG+KKTA AV K +V G PL + P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 203 VXIXXXVKGGGXVAQVYVS 259
+ I V GGG V+Q Y +
Sbjct: 69 LRIDVAVHGGGQVSQAYAA 87
Score = 40.7 bits (91), Expect = 0.018
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +1
Query: 226 GWWSXSTSLRIRQAISKALIAFXQKYVXXASKKEIKDXLVQYDRSLL 366
G S + RQAI+K LIAF QKY K +KD + YD+ LL
Sbjct: 77 GGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKFLL 123
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 49.2 bits (112), Expect = 5e-05
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1
Query: 256 IRQAISKALIAFXQKYVXXASKKEIKDXLVQYDRSLL 366
IRQAI+K+L+A+ QKYV SK ++K VQYDR+LL
Sbjct: 93 IRQAIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLL 129
Score = 35.9 bits (79), Expect = 0.51
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 164 EPILLLGKEKFSMVXIXXXVKGGGXVAQVY 253
EP+L++G +KF+ V I V GGG +QVY
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVY 91
Score = 35.1 bits (77), Expect = 0.88
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +3
Query: 387 EXKKFGGXXGRARYQKSYR 443
E KKFGG RARYQKSYR
Sbjct: 137 EPKKFGGRGARARYQKSYR 155
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +2
Query: 47 GRKKTATAVXYXKXGXGMXRVXGRPLDLVXPXLLQYKLQEPILLLGKEKFSMVXIXXXVK 226
G++K A A + G G + G PL++ + + K+ EP+L+ G+ S+V I V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 227 GGGXVAQ 247
GGG + Q
Sbjct: 71 GGGVMGQ 77
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 38.3 bits (85), Expect = 0.095
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +2
Query: 17 REPIQAVQVFGRKKTATAVXYXKXGXGMXRV 109
R P VQ FGRKKTA AV Y K G G+ +V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 35.5 bits (78), Expect = 0.67
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 35 VQVFGRKKTATAVXYXKXGXGMXRVXGRPL-DLVXPXLLQYKLQEPILL-LGKEKFSMVX 208
+ GR+KTA A Y K G G+ +V P + LL K+ +P+LL + KF
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKFD--- 64
Query: 209 IXXXVKGGGXVAQ 247
V GGG +Q
Sbjct: 65 FYIKVSGGGINSQ 77
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 35.1 bits (77), Expect = 0.88
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +3
Query: 387 EXKKFGGXXGRARYQKSYR 443
E KKFGG RARYQKSYR
Sbjct: 127 EPKKFGGPGARARYQKSYR 145
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 33.1 bits (72), Expect = 3.6
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 47 GRKKTATAVXYXKXGXGMXRVXGRPLD-LVXPXLLQYKLQEPILLLGKEKFSMVXIXXXV 223
GR+KT+TA + G G V G+PLD + +++P+ LL + I V
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 224 KGGGXVAQ 247
KGGG Q
Sbjct: 66 KGGGINGQ 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,648,062
Number of Sequences: 1657284
Number of extensions: 5730473
Number of successful extensions: 9772
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9770
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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