Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30875.Seq
         (449 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             31   0.006
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    26   0.17 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.2  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 31.1 bits (67), Expect = 0.006
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 121  GTLPKLGNWRNLDRTQVVNIVELIQR 44
            GT PK G +RN DR  +V  V  +QR
Sbjct: 1032 GTRPKRGKYRNYDRDSLVEAVRAVQR 1057


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +1

Query: 139 NDDRIVGGQEAFIDDYPHQVSFVVNNTY----FCGGSIISE 249
           N  RIVGG    I+++P      +  TY     CG +IIS+
Sbjct: 157 NPSRIVGGTNTGINEFPMMAG--IKRTYEPGMICGATIISK 195


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 225 LRRLXHQRELXXTXXHCSQNVDPSTVXLRXG 317
           L+RL HQ        H  QNV  + V +  G
Sbjct: 510 LKRLDHQPYQYKIAVHSEQNVPGAVVRVFLG 540


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,395
Number of Sequences: 438
Number of extensions: 1905
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)