Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30871.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071539-1|AAL49161.1|  124|Drosophila melanogaster RE57810p pro...    54   8e-08
AE014296-3496|AAF51690.1|  124|Drosophila melanogaster CG12975-P...    54   8e-08
BT012668-1|AAT08474.1|  119|Drosophila melanogaster RE50359p pro...    28   6.1  

>AY071539-1|AAL49161.1|  124|Drosophila melanogaster RE57810p
           protein.
          Length = 124

 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 24/67 (35%), Positives = 37/67 (55%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL +     +V E +FNP F+ R++PKLDW  ++ AA     ++ +P        ENE
Sbjct: 20  GFPLKLTINKKEVVESEFNPTFVERILPKLDWSAVYGAAQVAELTEDIPAVQPENIVENE 79

Query: 440 EFLKKAH 460
             L+K H
Sbjct: 80  LLLQKLH 86


>AE014296-3496|AAF51690.1|  124|Drosophila melanogaster CG12975-PA
           protein.
          Length = 124

 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 24/67 (35%), Positives = 37/67 (55%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL +     +V E +FNP F+ R++PKLDW  ++ AA     ++ +P        ENE
Sbjct: 20  GFPLKLTINKKEVVESEFNPTFVERILPKLDWSAVYGAAQVAELTEDIPAVQPENIVENE 79

Query: 440 EFLKKAH 460
             L+K H
Sbjct: 80  LLLQKLH 86


>BT012668-1|AAT08474.1|  119|Drosophila melanogaster RE50359p
           protein.
          Length = 119

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
 Frame = -1

Query: 355 PIQLWYYTTNKFRIKIDFFNFNVCR--VNCKRIASQT--PFKHFEVSILWVISFIIIFVL 188
           P+Q++    N  R  + FFN N  +  ++ +R+ S+      +F+ + +++   ++I+ L
Sbjct: 38  PLQIFQMVRNSLRPWVVFFNINNFKTAISMQRLNSRVIRNLSYFQANYVFIFFVLMIYCL 97

Query: 187 CNFSRN*SL 161
            N   + SL
Sbjct: 98  YNLKHHGSL 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,029,306
Number of Sequences: 53049
Number of extensions: 382423
Number of successful extensions: 886
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)