Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30868.Seq
(409 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40226-1|AAB01760.1| 76|Drosophila melanogaster L43 protein. 65 3e-11
AE013599-3176|AAF46708.1| 76|Drosophila melanogaster CG10071-P... 65 3e-11
AE013599-3175|AAM70864.1| 76|Drosophila melanogaster CG10071-P... 65 3e-11
AE013599-3174|AAM70863.1| 76|Drosophila melanogaster CG10071-P... 65 3e-11
AY075553-1|AAL68360.1| 56|Drosophila melanogaster RH58777p pro... 64 9e-11
AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-P... 29 3.1
AE013599-1922|AAO41391.1| 1633|Drosophila melanogaster CG12864-P... 29 3.1
AE014296-847|AAF47899.1| 604|Drosophila melanogaster CG15020-PA... 27 7.2
AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB... 27 9.5
AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA... 27 9.5
>U40226-1|AAB01760.1| 76|Drosophila melanogaster L43 protein.
Length = 76
Score = 65.3 bits (152), Expect = 3e-11
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWXQNF*GIKGFARRVT*SQPSNSRGR 344
MAKSKNHTNHNQN+KAHRNGIK+P + RHE L F + +AR+ S+ + + R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVK-R 59
Query: 345 LREKLPE---KPXP 377
E++ KP P
Sbjct: 60 YNERIASQKGKPKP 73
>AE013599-3176|AAF46708.1| 76|Drosophila melanogaster CG10071-PC,
isoform C protein.
Length = 76
Score = 65.3 bits (152), Expect = 3e-11
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWXQNF*GIKGFARRVT*SQPSNSRGR 344
MAKSKNHTNHNQN+KAHRNGIK+P + RHE L F + +AR+ S+ + + R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVK-R 59
Query: 345 LREKLPE---KPXP 377
E++ KP P
Sbjct: 60 YNERIASQKGKPKP 73
>AE013599-3175|AAM70864.1| 76|Drosophila melanogaster CG10071-PB,
isoform B protein.
Length = 76
Score = 65.3 bits (152), Expect = 3e-11
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWXQNF*GIKGFARRVT*SQPSNSRGR 344
MAKSKNHTNHNQN+KAHRNGIK+P + RHE L F + +AR+ S+ + + R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVK-R 59
Query: 345 LREKLPE---KPXP 377
E++ KP P
Sbjct: 60 YNERIASQKGKPKP 73
>AE013599-3174|AAM70863.1| 76|Drosophila melanogaster CG10071-PA,
isoform A protein.
Length = 76
Score = 65.3 bits (152), Expect = 3e-11
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWXQNF*GIKGFARRVT*SQPSNSRGR 344
MAKSKNHTNHNQN+KAHRNGIK+P + RHE L F + +AR+ S+ + + R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVK-R 59
Query: 345 LREKLPE---KPXP 377
E++ KP P
Sbjct: 60 YNERIASQKGKPKP 73
>AY075553-1|AAL68360.1| 56|Drosophila melanogaster RH58777p
protein.
Length = 56
Score = 63.7 bits (148), Expect = 9e-11
Identities = 27/39 (69%), Positives = 30/39 (76%)
Frame = +3
Query: 165 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHEPPLAWXQNF 281
MAKSKNHTNHNQN+KAHRNGIK+P + RHE L F
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKF 39
>AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-PA,
isoform A protein.
Length = 3257
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 135 FPLQD*KLIKMAKSKNHTNHNQNRKAHRNGIKKPRKTR 248
FP+QD ++ KM+K + H N +N K + K + R
Sbjct: 2256 FPVQDAEIEKMSKGRGHQNAVKNTKTEQPKSKPKTEVR 2293
>AE013599-1922|AAO41391.1| 1633|Drosophila melanogaster CG12864-PB,
isoform B protein.
Length = 1633
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 135 FPLQD*KLIKMAKSKNHTNHNQNRKAHRNGIKKPRKTR 248
FP+QD ++ KM+K + H N +N K + K + R
Sbjct: 632 FPVQDAEIEKMSKGRGHQNAVKNTKTEQPKSKPKTEVR 669
>AE014296-847|AAF47899.1| 604|Drosophila melanogaster CG15020-PA
protein.
Length = 604
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 222 HFCELCGFGYDLYDSLTLPF 163
HF C +GYD + ++T PF
Sbjct: 313 HFKVTCEYGYDFWKTVTFPF 332
>AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB,
isoform B protein.
Length = 3313
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 174 SKNHTNHNQNRKAHRNG 224
SKN+ NHNQN+ NG
Sbjct: 544 SKNNNNHNQNQNVTANG 560
>AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA,
isoform A protein.
Length = 3313
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 174 SKNHTNHNQNRKAHRNG 224
SKN+ NHNQN+ NG
Sbjct: 544 SKNNNNHNQNQNVTANG 560
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,409,474
Number of Sequences: 53049
Number of extensions: 241943
Number of successful extensions: 864
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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