Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30863.Seq
         (427 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113508-1|AAM29513.1|  124|Drosophila melanogaster RE59131p pro...    96   2e-20
AE013599-889|AAM71074.1|  124|Drosophila melanogaster CG1821-PC,...    96   2e-20
AE013599-888|AAF58920.1|  124|Drosophila melanogaster CG1821-PB,...    96   2e-20
AE013599-887|AAM71073.1|  124|Drosophila melanogaster CG1821-PA,...    96   2e-20
BT023181-1|AAY55597.1|  535|Drosophila melanogaster IP03329p pro...    27   7.9  
BT023144-1|AAY55560.1|  535|Drosophila melanogaster IP03529p pro...    27   7.9  
BT010282-1|AAQ23600.1| 1001|Drosophila melanogaster RE04457p pro...    27   7.9  
AY118429-1|AAM48458.1|  163|Drosophila melanogaster RH26504p pro...    27   7.9  
AE014298-1203|AAS65290.1| 1001|Drosophila melanogaster CG11265-P...    27   7.9  
AE014298-1202|AAS65289.1| 1029|Drosophila melanogaster CG11265-P...    27   7.9  
AE014298-1201|AAS65288.1| 1029|Drosophila melanogaster CG11265-P...    27   7.9  
AE014298-1200|AAF46390.2| 1029|Drosophila melanogaster CG11265-P...    27   7.9  
AE014296-3393|AAN12138.1|  163|Drosophila melanogaster CG5104-PB...    27   7.9  
AE014296-2496|AAF49648.1|  535|Drosophila melanogaster CG12327-P...    27   7.9  

>AY113508-1|AAM29513.1|  124|Drosophila melanogaster RE59131p
           protein.
          Length = 124

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 40/56 (71%), Positives = 51/56 (91%)
 Frame = +2

Query: 89  IVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSR 256
           +VTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R+DTRLNK +WS+
Sbjct: 17  VVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSK 72



 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = +1

Query: 256 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 411
           G+R+ PF          NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 73  GIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124


>AE013599-889|AAM71074.1|  124|Drosophila melanogaster CG1821-PC,
           isoform C protein.
          Length = 124

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 40/56 (71%), Positives = 51/56 (91%)
 Frame = +2

Query: 89  IVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSR 256
           +VTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R+DTRLNK +WS+
Sbjct: 17  VVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSK 72



 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = +1

Query: 256 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 411
           G+R+ PF          NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 73  GIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124


>AE013599-888|AAF58920.1|  124|Drosophila melanogaster CG1821-PB,
           isoform B protein.
          Length = 124

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 40/56 (71%), Positives = 51/56 (91%)
 Frame = +2

Query: 89  IVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSR 256
           +VTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R+DTRLNK +WS+
Sbjct: 17  VVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSK 72



 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = +1

Query: 256 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 411
           G+R+ PF          NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 73  GIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124


>AE013599-887|AAM71073.1|  124|Drosophila melanogaster CG1821-PA,
           isoform A protein.
          Length = 124

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 40/56 (71%), Positives = 51/56 (91%)
 Frame = +2

Query: 89  IVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSR 256
           +VTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R+DTRLNK +WS+
Sbjct: 17  VVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSK 72



 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = +1

Query: 256 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 411
           G+R+ PF          NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 73  GIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124


>BT023181-1|AAY55597.1|  535|Drosophila melanogaster IP03329p
           protein.
          Length = 535

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 3   FFFFFWYTKLKITMAKPKGERKGKSAINELLPVNIQLIY 119
           FFFF  + K+  T+  P G+      +N L+  N+Q+ Y
Sbjct: 285 FFFFMGWLKVAETLICPFGDDDDDFELNWLIDRNLQVSY 323


>BT023144-1|AAY55560.1|  535|Drosophila melanogaster IP03529p
           protein.
          Length = 535

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 3   FFFFFWYTKLKITMAKPKGERKGKSAINELLPVNIQLIY 119
           FFFF  + K+  T+  P G+      +N L+  N+Q+ Y
Sbjct: 285 FFFFMGWLKVAETLICPFGDDDDDFELNWLIDRNLQVSY 323


>BT010282-1|AAQ23600.1| 1001|Drosophila melanogaster RE04457p
           protein.
          Length = 1001

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 328 VRNLHHHYVFVKASHGHGREH 266
           V+ L+HH V V  +HGH   H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640


>AY118429-1|AAM48458.1|  163|Drosophila melanogaster RH26504p
           protein.
          Length = 163

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = -2

Query: 309 ITSS*KPHTDTEGNISDSLDQRNLFKRVSTRMSGVPICFSANFRISLIALGARFLN 142
           + S  +P  + E +I   ++  +     STR+ G  ICF+    +SL+   A FL+
Sbjct: 7   VLSGDEPTPEEESSIITQINDMSTLSW-STRIKGFVICFALGILLSLLGSVALFLH 61


>AE014298-1203|AAS65290.1| 1001|Drosophila melanogaster CG11265-PE,
           isoform E protein.
          Length = 1001

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 328 VRNLHHHYVFVKASHGHGREH 266
           V+ L+HH V V  +HGH   H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640


>AE014298-1202|AAS65289.1| 1029|Drosophila melanogaster CG11265-PC,
           isoform C protein.
          Length = 1029

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 328 VRNLHHHYVFVKASHGHGREH 266
           V+ L+HH V V  +HGH   H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640


>AE014298-1201|AAS65288.1| 1029|Drosophila melanogaster CG11265-PB,
           isoform B protein.
          Length = 1029

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 328 VRNLHHHYVFVKASHGHGREH 266
           V+ L+HH V V  +HGH   H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640


>AE014298-1200|AAF46390.2| 1029|Drosophila melanogaster CG11265-PA,
           isoform A protein.
          Length = 1029

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 328 VRNLHHHYVFVKASHGHGREH 266
           V+ L+HH V V  +HGH   H
Sbjct: 620 VQQLYHHPVQVPTAHGHSHAH 640


>AE014296-3393|AAN12138.1|  163|Drosophila melanogaster CG5104-PB
           protein.
          Length = 163

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = -2

Query: 309 ITSS*KPHTDTEGNISDSLDQRNLFKRVSTRMSGVPICFSANFRISLIALGARFLN 142
           + S  +P  + E +I   ++  +     STR+ G  ICF+    +SL+   A FL+
Sbjct: 7   VLSGDEPTPEEESSIITQINDMSTLSW-STRIKGFVICFALGILLSLLGSVALFLH 61


>AE014296-2496|AAF49648.1|  535|Drosophila melanogaster CG12327-PA
           protein.
          Length = 535

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 3   FFFFFWYTKLKITMAKPKGERKGKSAINELLPVNIQLIY 119
           FFFF  + K+  T+  P G+      +N L+  N+Q+ Y
Sbjct: 285 FFFFMGWLKVAETLICPFGDDDDDFELNWLIDRNLQVSY 323


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,390,100
Number of Sequences: 53049
Number of extensions: 354576
Number of successful extensions: 768
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)