Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30862.Seq
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015197-1|AAT94426.1|  954|Drosophila melanogaster RE71183p pro...   166   2e-41
AE014296-2238|AAF49848.1|  954|Drosophila melanogaster CG11274-P...   166   2e-41
AE014296-3448|AAF51661.2| 1058|Drosophila melanogaster CG10588-P...    29   3.6  
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB...    29   4.8  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    29   4.8  
BT023411-1|AAY55827.1|  250|Drosophila melanogaster IP10429p pro...    28   8.4  
AE014297-3745|AAF56426.1|  250|Drosophila melanogaster CG11854-P...    28   8.4  

>BT015197-1|AAT94426.1|  954|Drosophila melanogaster RE71183p
           protein.
          Length = 954

 Score =  166 bits (403), Expect = 2e-41
 Identities = 78/115 (67%), Positives = 94/115 (81%), Gaps = 1/115 (0%)
 Frame = +3

Query: 255 FSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQL- 431
           FSDKEKKLMKQMKFGDCL ++VDMSKVKLDVL+PWI++KIT+IL++EDDVV+E+V NQL 
Sbjct: 14  FSDKEKKLMKQMKFGDCLNKRVDMSKVKLDVLRPWISKKITDILHIEDDVVVEFVYNQLE 73

Query: 432 EEKFPCPKKMADQLDWIPKWKERTPFMGELWELLLSAQASENGIPESFTQQKKEE 596
           EEK+PCPKKM   +      +    FMGELW LLLSAQ S++GIP  F QQKK+E
Sbjct: 74  EEKYPCPKKMQINMTGFLNGRNARQFMGELWALLLSAQESDSGIPAEFIQQKKDE 128


>AE014296-2238|AAF49848.1|  954|Drosophila melanogaster CG11274-PA
           protein.
          Length = 954

 Score =  166 bits (403), Expect = 2e-41
 Identities = 78/115 (67%), Positives = 94/115 (81%), Gaps = 1/115 (0%)
 Frame = +3

Query: 255 FSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQL- 431
           FSDKEKKLMKQMKFGDCL ++VDMSKVKLDVL+PWI++KIT+IL++EDDVV+E+V NQL 
Sbjct: 14  FSDKEKKLMKQMKFGDCLNKRVDMSKVKLDVLRPWISKKITDILHIEDDVVVEFVYNQLE 73

Query: 432 EEKFPCPKKMADQLDWIPKWKERTPFMGELWELLLSAQASENGIPESFTQQKKEE 596
           EEK+PCPKKM   +      +    FMGELW LLLSAQ S++GIP  F QQKK+E
Sbjct: 74  EEKYPCPKKMQINMTGFLNGRNARQFMGELWALLLSAQESDSGIPAEFIQQKKDE 128


>AE014296-3448|AAF51661.2| 1058|Drosophila melanogaster CG10588-PA
           protein.
          Length = 1058

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -3

Query: 461 HFLWAWELFFKLVGDIFNDNIIFHV*NFCYLLSDPRLQHVE 339
           H LW   +   +    F+ N I+ + N C  LSD    H++
Sbjct: 362 HHLWCISVVAGVAESSFDSNSIYSLFNICIYLSDDGFDHID 402


>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
            isoform B protein.
          Length = 7744

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +3

Query: 255  FSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEI 383
            F+D  K++ ++ +  D   + V+ +K ++D L+ W+ Q+I E+
Sbjct: 6266 FADLGKRIDRKSQLLDVTNKGVEGAKGEIDQLQNWVKQQIEEL 6308


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/43 (27%), Positives = 27/43 (62%)
 Frame = +3

Query: 255  FSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEI 383
            F+D  K++ ++ +  D   + V+ +K ++D L+ W+ Q+I E+
Sbjct: 6266 FADLGKRIDRKSQLLDVTNKGVEGAKGEIDQLQNWVKQQIEEL 6308


>BT023411-1|AAY55827.1|  250|Drosophila melanogaster IP10429p
           protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
 Frame = +3

Query: 306 LTQQVDMSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMADQL---- 473
           LT+    +++KL  +     Q   E++N++ ++   +VT QLE  F   K +++ +    
Sbjct: 149 LTRTKVRAQIKLKRVSKGDHQTYAEVMNIKVELDPSHVTYQLENLFNGQKDLSENMHALI 208

Query: 474 --DWIPKWKERTPFMGELWELL 533
             +W   + E  P +GE + L+
Sbjct: 209 NENWKDIFNELKPGIGEAFGLI 230


>AE014297-3745|AAF56426.1|  250|Drosophila melanogaster CG11854-PA
           protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
 Frame = +3

Query: 306 LTQQVDMSKVKLDVLKPWITQKITEILNMEDDVVIEYVTNQLEEKFPCPKKMADQL---- 473
           LT+    +++KL  +     Q   E++N++ ++   +VT QLE  F   K +++ +    
Sbjct: 149 LTRTKVRAQIKLKRVSKGDHQTYAEVMNIKVELDPSHVTYQLENLFNGQKDLSENMHALI 208

Query: 474 --DWIPKWKERTPFMGELWELL 533
             +W   + E  P +GE + L+
Sbjct: 209 NENWKDIFNELKPGIGEAFGLI 230


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,004,035
Number of Sequences: 53049
Number of extensions: 533853
Number of successful extensions: 1221
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)