Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30858.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   2.9  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   2.9  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   2.9  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   2.9  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   5.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   5.0  
AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding pr...    23   6.6  

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 325 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 411
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 325 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 411
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 325 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 411
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 325 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 411
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 490 RHLDEGNIGGGSHGAC 443
           R  +EG  G GSHG C
Sbjct: 346 RIANEGGTGCGSHGCC 361


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 490 RHLDEGNIGGGSHGAC 443
           R  +EG  G GSHG C
Sbjct: 346 RIANEGGTGCGSHGCC 361


>AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding
           protein AgamOBP14 protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 522 PLRGAPXPPSSATLTREILAVVATALVC 439
           PL+  P P +S  +  + L  + TA+ C
Sbjct: 32  PLQQDPVPATSTFIVSDFLQFLQTAVTC 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,806
Number of Sequences: 2352
Number of extensions: 8208
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)