Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30855.Seq
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical pr... 121 5e-28
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 33 0.22
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis... 30 1.2
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 30 1.2
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis... 30 1.2
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis... 30 1.2
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis... 30 1.2
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 30 1.2
Z93396-5|CAB07714.1| 633|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z50109-5|CAA90438.1| 325|Caenorhabditis elegans Hypothetical pr... 29 3.6
DQ645956-1|ABG36764.1| 624|Caenorhabditis elegans molting prote... 29 3.6
Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z81521-5|CAE17802.1| 657|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z81498-2|CAB04085.1| 760|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z81498-1|CAB04086.1| 692|Caenorhabditis elegans Hypothetical pr... 27 8.3
U12682-1|AAB63525.1| 692|Caenorhabditis elegans celfurPC protei... 27 8.3
AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine r... 27 8.3
>Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical
protein JC8.3a protein.
Length = 165
Score = 121 bits (291), Expect = 5e-28
Identities = 60/102 (58%), Positives = 77/102 (75%)
Frame = +3
Query: 252 KDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVI 431
+DWKGLK+T +LT+QNR A+I VVPSAA+LI++ LKEPPRDRKK KN+KHNG+++++ +I
Sbjct: 51 QDWKGLKVTCKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTII 110
Query: 432 GIAKIMRNXSMARYLSGXSKRGFLGTHSSVGMYCGGAGPPHD 557
IA+IMR SMA+ L G K LGT SVG G PHD
Sbjct: 111 KIARIMRPRSMAKKLEGTVKE-ILGTAQSVGCTIDGQ-HPHD 150
Score = 100 bits (239), Expect = 1e-21
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +1
Query: 103 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATRTGRVSRSLC 282
MPPKFDP EIKIV LRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT+ + + C
Sbjct: 1 MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTC 60
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 117 KLRGHFVDYLVQLYTIITLNPNGWVWIPQGYRLNVQR 7
K R +D L +L TI GWVW+ G + NVQR
Sbjct: 305 KCRKQKIDMLNELATIFKKRSFGWVWMEGGAQENVQR 341
>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug
resistance related protein1 protein.
Length = 1540
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 383 LFTVTRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTF 222
+F + R L+ GSD + G NNS + V NC H+D T+P L + S F
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIPTLFLVIFSPILF 55
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform e protein.
Length = 1534
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 383 LFTVTRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTF 222
+F + R L+ GSD + G NNS + V NC H+D T+P L + S F
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIPTLFLVIFSPILF 55
>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform c protein.
Length = 1534
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 383 LFTVTRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTF 222
+F + R L+ GSD + G NNS + V NC H+D T+P L + S F
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIPTLFLVIFSPILF 55
>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform b protein.
Length = 1534
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 383 LFTVTRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTF 222
+F + R L+ GSD + G NNS + V NC H+D T+P L + S F
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIPTLFLVIFSPILF 55
>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform a protein.
Length = 1528
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 383 LFTVTRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTF 222
+F + R L+ GSD + G NNS + V NC H+D T+P L + S F
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIPTLFLVIFSPILF 55
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 383 LFTVTRRLLKGSDDKGCCRG--NNSYLGLSVLNCQLHSDLETLPVLVALAMSSPTF 222
+F + R L+ GSD + G NNS + V NC H+D T+P L + S F
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNIP-QVTNCGQHTDFSTIPTLFLVIFSPILF 55
>Z93396-5|CAB07714.1| 633|Caenorhabditis elegans Hypothetical
protein ZC15.7 protein.
Length = 633
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 570 SSNKNHVAALPLHSTSQLNCACPRILF 490
+S ++H+ A P H +Q + C +ILF
Sbjct: 308 NSTRDHIGATPAHYAAQFSVECLKILF 334
>Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical
protein M01G12.6 protein.
Length = 419
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 200 VLLVCLLKRWVMTLPR--PQGLEGSQDHCAADSS 295
+L++CLLKRW M L PQ + D+ + S
Sbjct: 180 ILMICLLKRWKMNLVEKFPQNITKHMDYTPVNIS 213
>Z50109-5|CAA90438.1| 325|Caenorhabditis elegans Hypothetical
protein C09H10.7 protein.
Length = 325
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 622 DIKKHFXHPMVKTPAXDVIK*ESCGGP 542
DIKK F H + T + + E+CGGP
Sbjct: 68 DIKKVFFHSFIVTRNAEKLATENCGGP 94
>DQ645956-1|ABG36764.1| 624|Caenorhabditis elegans molting protein
MLT-4 protein.
Length = 624
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 570 SSNKNHVAALPLHSTSQLNCACPRILF 490
+S ++H+ A P H +Q + C +ILF
Sbjct: 308 NSTRDHIGATPAHYAAQFSVECLKILF 334
>Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical
protein K12D12.3 protein.
Length = 333
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +3
Query: 420 EDVIGIAKIMRNXSMARYLSGXSKRGFLGTHSSVGMYCGGAGPPHDSYLMTSXAGVLTIG 599
+D++ I R SG S+ G+ + ++ G Y GA P HD T G
Sbjct: 55 KDLVQIGTNAATNRRGRRDSGYSEGGYAASGNTGGSYHPGAAPAHDFGAQAPAGPAPTGG 114
Query: 600 XIKC 611
+C
Sbjct: 115 SCQC 118
>Z81521-5|CAE17802.1| 657|Caenorhabditis elegans Hypothetical
protein F32A11.7 protein.
Length = 657
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 499 NPLLLXPERYRAIXLFLMIFAMPITSSREMLPLCLIFFC 383
NP +L P L +IFA I S + + PL L FC
Sbjct: 557 NPFILCPGSMNPFVLSPLIFAPFILSPQVLTPLILTPFC 595
>Z81498-2|CAB04085.1| 760|Caenorhabditis elegans Hypothetical
protein F11A6.1b protein.
Length = 760
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = +1
Query: 145 LRCVGGEVGATSSLAPKIGPLGLSPKKVGD------DIAKATRTGRVSRSLCS*QFKTDK 306
+R GG+V + LA K G L P GD D K +R+ R +RSL + Q + ++
Sbjct: 64 VRIAGGKVEEANRLANKYGYTNLGPIIPGDEYYLFRDDRKKSRSSRKTRSLSANQLQHEE 123
>Z81498-1|CAB04086.1| 692|Caenorhabditis elegans Hypothetical
protein F11A6.1a protein.
Length = 692
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = +1
Query: 145 LRCVGGEVGATSSLAPKIGPLGLSPKKVGD------DIAKATRTGRVSRSLCS*QFKTDK 306
+R GG+V + LA K G L P GD D K +R+ R +RSL + Q + ++
Sbjct: 64 VRIAGGKVEEANRLANKYGYTNLGPIIPGDEYYLFRDDRKKSRSSRKTRSLSANQLQHEE 123
>U12682-1|AAB63525.1| 692|Caenorhabditis elegans celfurPC protein
protein.
Length = 692
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = +1
Query: 145 LRCVGGEVGATSSLAPKIGPLGLSPKKVGD------DIAKATRTGRVSRSLCS*QFKTDK 306
+R GG+V + LA K G L P GD D K +R+ R +RSL + Q + ++
Sbjct: 64 VRIAGGKVEEANRLANKYGYTNLGPIIPGDEYYLFRDDRKKSRSSRKTRSLSANQLQHEE 123
>AC024826-13|AAF60794.2| 305|Caenorhabditis elegans Serpentine
receptor, class x protein12 protein.
Length = 305
Score = 27.5 bits (58), Expect = 8.3
Identities = 8/31 (25%), Positives = 14/31 (45%)
Frame = -2
Query: 129 FIWVKLRGHFVDYLVQLYTIITLNPNGWVWI 37
F+W GH + Y + + +P W W+
Sbjct: 131 FVWSMAIGHVIPYFWRETCYVAYDPVSWTWV 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,148,980
Number of Sequences: 27780
Number of extensions: 318010
Number of successful extensions: 849
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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