Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30854.Seq
(598 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein. 23 2.6
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 2.6
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 23 2.6
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 2.6
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.5
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.5
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.5
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.5
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.5
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 7.9
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 7.9
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 21 7.9
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 7.9
>AY321476-2|AAQ23387.1| 257|Tribolium castaneum Ase protein.
Length = 257
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 61 TDVKVAPNFVFGETNKSED 117
++ ++P+ VFG+ KSED
Sbjct: 201 SEQSLSPDTVFGDDGKSED 219
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 22.6 bits (46), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3
Query: 158 SNAGTFPAGNFFKKSSDL 105
S GT+P+ N++ +SD+
Sbjct: 12 SQHGTYPSDNYYNYTSDI 29
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 22.6 bits (46), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3
Query: 158 SNAGTFPAGNFFKKSSDL 105
S GT+P+ N++ +SD+
Sbjct: 12 SQHGTYPSDNYYNYTSDI 29
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 22.6 bits (46), Expect = 2.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3
Query: 158 SNAGTFPAGNFFKKSSDL 105
S GT+P+ N++ +SD+
Sbjct: 12 SQHGTYPSDNYYNYTSDI 29
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 474 HCCMLFSTWLHPASVSSLINVSALGPD 554
HC M F +W + + L+ S G D
Sbjct: 141 HCDMKFGSWTYDGNQLDLVLNSESGGD 167
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 474 HCCMLFSTWLHPASVSSLINVSALGPD 554
HC M F +W + + L+ S G D
Sbjct: 141 HCDMKFGSWTYDGNQLDLVLNSESGGD 167
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 474 HCCMLFSTWLHPASVSSLINVSALGPD 554
HC M F +W + + L+ S G D
Sbjct: 141 HCDMKFGSWTYDGNQLDLVLNSESGGD 167
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 474 HCCMLFSTWLHPASVSSLINVSALGPD 554
HC M F +W + + L+ S G D
Sbjct: 141 HCDMKFGSWTYDGNQLDLVLNSESGGD 167
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 474 HCCMLFSTWLHPASVSSLINVSALGPD 554
HC M F +W + + L+ S G D
Sbjct: 141 HCDMKFGSWTYDGNQLDLVLNSESGGD 167
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 94 QIRNSVLLSHQSRNIVRRSTLYKRG 20
QIR + +SH+ N L++RG
Sbjct: 218 QIRGTFFVSHKYTNYSAVQDLHRRG 242
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 94 QIRNSVLLSHQSRNIVRRSTLYKRG 20
QIR + +SH+ N L++RG
Sbjct: 225 QIRGTFFVSHKYTNYSAVQDLHRRG 249
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 21.0 bits (42), Expect = 7.9
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1
Query: 394 KYWTDIFSHAP 426
K+WTDI++ P
Sbjct: 501 KFWTDIYNSNP 511
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 21.0 bits (42), Expect = 7.9
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1
Query: 394 KYWTDIFSHAP 426
K+WTDI++ P
Sbjct: 503 KFWTDIYNSNP 513
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,359
Number of Sequences: 336
Number of extensions: 3186
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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