Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30854.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    32   0.012
AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    28   0.26 
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    27   0.61 
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   5.7  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   5.7  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   7.5  

>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 32.3 bits (70), Expect = 0.012
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = +1

Query: 37  LIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVA 216
           L+ A++   ++ +    V    +   +FLK  P   +P    ADG V++ ES+AI  Y+A
Sbjct: 19  LLFAKWLKLELNLIELDVLKRDHYKPEFLKLNPQHYIPTLVDADGDVVVWESSAILIYLA 78


>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 27.9 bits (59), Expect = 0.26
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +1

Query: 100 TNKSEDFLKKFPAGKVPAFESADGK--VLLTESNAIAYYV 213
           + K E +L+K P GKVPA E   GK  V L ES  ++ Y+
Sbjct: 55  SEKPEWYLEKNPLGKVPALE-IPGKEGVTLYESLVLSDYI 93


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 249 GSQISSAETFIGNVVSDGIAFS*KHLSIGTFEC 151
           GSQ  +AE F G +  +GI +  K +     EC
Sbjct: 88  GSQTGTAEEFAGRLAKEGIRYQMKGMVADPEEC 120


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = -3

Query: 176 TFPSALSNAGTFPAGNFFKKSSDLLVSPNTKFGATFTSVPEYCAAINAL 30
           T P+ ++     P+      S DLL+   T    T    PEY   ++ L
Sbjct: 291 TLPNIVNFIAQLPSDELRLSSIDLLLQSLTAENGTLVQDPEYVYRLSQL 339


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 315  PKRRKQAVVRCQTMMPTARHGLGSQISSAE 226
            P+RR+QA  + +  M   R   G  +SSAE
Sbjct: 1158 PRRRRQAQRQARAHMLPDRQQNGRAVSSAE 1187


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 214 ANESLRGGDLATQAVSGSGHHGLTANYCLLP 306
           AN  L G      + SGSG+      YC LP
Sbjct: 63  ANAKLPGAGPIVSSSSGSGNSSKKYAYCGLP 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,502
Number of Sequences: 2352
Number of extensions: 14032
Number of successful extensions: 47
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)