Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30854.Seq
(598 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 25 0.75
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 25 0.75
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 25 0.75
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.0
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 4.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 5.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 6.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 6.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 6.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 6.9
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 21 9.2
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.6 bits (51), Expect = 0.75
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 234 RRSGYPSRVWQWASWSDSELLPASCAWVFPY-LGIMQFNKQNVERAKSDLLAALK 395
R SG ++ +W +WS+ +L Y + +E+++ D L A+K
Sbjct: 377 RNSGATDKIIRWCTWSEGDLEKCKALTRAAYSRDVRPKYDCTLEKSQDDCLKAIK 431
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.6 bits (51), Expect = 0.75
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 234 RRSGYPSRVWQWASWSDSELLPASCAWVFPY-LGIMQFNKQNVERAKSDLLAALK 395
R SG ++ +W +WS+ +L Y + +E+++ D L A+K
Sbjct: 377 RNSGATDKIIRWCTWSEGDLEKCKALTRAAYSRDVRPKYDCTLEKSQDDCLKAIK 431
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 24.6 bits (51), Expect = 0.75
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 234 RRSGYPSRVWQWASWSDSELLPASCAWVFPY-LGIMQFNKQNVERAKSDLLAALK 395
R SG ++ +W +WS+ +L Y + +E+++ D L A+K
Sbjct: 377 RNSGATDKIIRWCTWSEGDLEKCKALTRAAYSRDVRPKYDCTLEKSQDDCLKAIK 431
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 474 HCCMLFSTWLHPASVSSLINVSALGPD 554
HC M F +W + + L+ S G D
Sbjct: 124 HCDMKFGSWTYDGNQVDLVLSSETGGD 150
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 474 HCCMLFSTWLHPASVSSLINVSALGPD 554
HC M F +W + + L+ S G D
Sbjct: 124 HCDMKFGSWTYDGNQVDLVLSSETGGD 150
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 474 HCCMLFSTWLHPASVSSLINVSALGPD 554
HC M F +W + + L+ S G D
Sbjct: 124 HCDMKFGSWTYDGNQVDLVLSSETGGD 150
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 474 HCCMLFSTWLHPASVSSLINVSALGPD 554
HC M F +W + + L+ S G D
Sbjct: 124 HCDMKFGSWTYDGNQVDLVLSSETGGD 150
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 474 HCCMLFSTWLHPASVSSLINVSALGPD 554
HC M F +W + + L+ S G D
Sbjct: 124 HCDMKFGSWTYDGNQVDLVLSSETGGD 150
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 474 HCCMLFSTWLHPASVSSLINVSALGPD 554
HC M F +W + + L+ S G D
Sbjct: 124 HCDMKFGSWTYDGNQVDLVLSSETGGD 150
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 474 HCCMLFSTWLHPASVSSLINVSALGPD 554
HC M F +W + + L+ S G D
Sbjct: 192 HCDMKFGSWTYDGNQVDLVLSSETGGD 218
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 474 HCCMLFSTWLHPASVSSLINVSALGPD 554
HC M F +W + + L+ S G D
Sbjct: 192 HCDMKFGSWTYDGNQVDLVLSSETGGD 218
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +3
Query: 84 FRIWRDQQVRRLLEEVSCRKSACIRKCRWKG 176
F IWRD ++ E + +A + W G
Sbjct: 32 FEIWRDSLPTKMRELNATACAALYERVEWSG 62
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 10 PENFRAYKALIAAQYSGTDVKVA 78
PE+F A ALI+ Q G + VA
Sbjct: 1620 PEHFVASYALISNQCEGDSLNVA 1642
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 6.9
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 267 TARHGLGSQISSAETFIGNVVSDGIAFS*KHLSIGTFECRHFSGRK 130
T +G S + V DG+ + S+ F C ++ GRK
Sbjct: 345 TTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 390
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 6.9
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 267 TARHGLGSQISSAETFIGNVVSDGIAFS*KHLSIGTFECRHFSGRK 130
T +G S + V DG+ + S+ F C ++ GRK
Sbjct: 314 TTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 359
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 6.9
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 267 TARHGLGSQISSAETFIGNVVSDGIAFS*KHLSIGTFECRHFSGRK 130
T +G S + V DG+ + S+ F C ++ GRK
Sbjct: 365 TTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 410
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 6.9
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 267 TARHGLGSQISSAETFIGNVVSDGIAFS*KHLSIGTFECRHFSGRK 130
T +G S + V DG+ + S+ F C ++ GRK
Sbjct: 314 TTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRK 359
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 232 GGDLATQAVSGSGHHGLTANYCL 300
G D QA SG + T NY L
Sbjct: 43 GSDEKRQAAIQSGDYNYTMNYLL 65
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,018
Number of Sequences: 438
Number of extensions: 3976
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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