Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30853.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   3.2  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    24   4.3  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    23   5.7  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   9.9  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   9.9  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 252 KLMSRYNQCNQVQQCRNPTILCIQGIS 172
           +L+ +YNQ +Q  QC    +L   G S
Sbjct: 360 ELLRKYNQSSQGSQCNQAIMLITDGPS 386


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 371 LHIATCFWQKKKQFYNGMELTAKITTPSILHTN 273
           L +   F Q+ KQF N     AK  +P   H+N
Sbjct: 144 LRLKHTFAQEAKQFCNAEIRAAKADSPENCHSN 176


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 358 VAICNYVCN*VVFLSIDNIGKHS*LHITQTIK 453
           V +C YVCN  V     +IG H  L+   TI+
Sbjct: 197 VVMCGYVCNLKVMTICCSIG-HCTLYTRMTIE 227


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +3

Query: 465 VSLYLSTAGCKPLPYPPQ*TILYLSHPIFFQHIATSHQPT 584
           V  YL + G +      Q  +L    P  F H A  H PT
Sbjct: 48  VGNYLFSLGLQQQQQQQQQQLLQQHPPSVFPHAALPHTPT 87


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +1

Query: 4   PKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLED 108
           PK+ + G+VL+V  ++ L  M V    + +  + D
Sbjct: 764 PKVFMLGIVLAVIAVVVLIGMAVLLLWKVLTSIHD 798


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,308
Number of Sequences: 2352
Number of extensions: 13161
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)