Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30851.Seq
         (528 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY748844-1|AAV28190.1|  107|Anopheles gambiae cytochrome P450 pr...    23   8.4  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    23   8.4  

>AY748844-1|AAV28190.1|  107|Anopheles gambiae cytochrome P450
           protein.
          Length = 107

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +3

Query: 363 DPRRCEPKKFGGPGARGQIP-EILPLS 440
           DP R +P++F G GA  Q P   LP S
Sbjct: 22  DPERFDPERF-GDGAPHQNPYAFLPFS 47


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 410 WPDTRNLTVKPSRKPSGG 463
           WP  R + + P   P GG
Sbjct: 196 WPKVRGVAMNPVEHPHGG 213


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,200
Number of Sequences: 2352
Number of extensions: 12054
Number of successful extensions: 30
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)