Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30850.Seq
(382 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 23 1.0
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 4.2
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 21 4.2
AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 21 4.2
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 21 4.2
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 4.2
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 20 7.3
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 20 7.3
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 20 7.3
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 20 9.6
DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein. 20 9.6
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 20 9.6
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 20 9.6
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 23.0 bits (47), Expect = 1.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 97 IPLNKRIRAAGRWFV 141
IPL +R RA WFV
Sbjct: 349 IPLGRRFRALKLWFV 363
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.0 bits (42), Expect = 4.2
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 72 SEDDFCEIDSIEQEDPCRRKVVCVL 146
S+++ C+ID+ P VCVL
Sbjct: 146 SDENTCDIDNDPNRAPPCDPAVCVL 170
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 21.0 bits (42), Expect = 4.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 67 ETVKMISVK*IPLNKRIRAAGRWF 138
E VKM+ ++ + LNK+I +F
Sbjct: 459 ELVKMLKIRFVILNKQINNLIEYF 482
>AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor
candidate 24 protein.
Length = 384
Score = 21.0 bits (42), Expect = 4.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 67 ETVKMISVK*IPLNKRIRAAGRWF 138
E VKM+ ++ + LNK+I +F
Sbjct: 184 ELVKMLKIRFVILNKQINNLIEYF 207
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.0 bits (42), Expect = 4.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 219 SIPSFCCLGQSPVLALISD 163
SIP+F CL S L L+ +
Sbjct: 216 SIPAFTCLPLSDQLLLLEE 234
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.0 bits (42), Expect = 4.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 219 SIPSFCCLGQSPVLALISD 163
SIP+F CL S L L+ +
Sbjct: 216 SIPAFTCLPLSDQLLLLEE 234
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 20.2 bits (40), Expect = 7.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 167 DIRARTGLCPKQQKDGIE 220
DIRA P+QQ DG E
Sbjct: 90 DIRAAGYYGPQQQMDGQE 107
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 20.2 bits (40), Expect = 7.3
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +1
Query: 283 KGYCSQSLIYEEASDCPEGNDC 348
KG+ +S+ C GN+C
Sbjct: 209 KGFFRRSITKNAVYQCKYGNNC 230
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 20.2 bits (40), Expect = 7.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = -1
Query: 367 IVTLKYNNHFLRDSLKLLHISKIDCSSLSRNILRRASESGLFY 239
I T+ Y L+ L ++ SSL NI + G+F+
Sbjct: 152 IATIAYETFQNLPELEDLDLAYNSISSLDFNIFDQVGSLGMFH 194
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 19.8 bits (39), Expect = 9.6
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +2
Query: 8 KRTRHHEVFIILCNVH 55
++T+H F+ LCN +
Sbjct: 530 QKTKHVRAFLGLCNFY 545
>DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein.
Length = 162
Score = 19.8 bits (39), Expect = 9.6
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 216 IPSFCCLGQ 190
IPSF C+G+
Sbjct: 60 IPSFACIGR 68
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 19.8 bits (39), Expect = 9.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 28 SFYYFVQCAF*FTETVKMIS 87
SFY+F+ F F T +I+
Sbjct: 238 SFYFFISTFFYFFTTGNIIA 257
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 19.8 bits (39), Expect = 9.6
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 28 SFYYFVQCAF*FTETVKMIS 87
SFY+F+ F F T +I+
Sbjct: 234 SFYFFISTFFYFFTTGNIIA 253
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,371
Number of Sequences: 336
Number of extensions: 1888
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 7908675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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