Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30850.Seq
(382 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15998-1|CAA34128.1| 2409|Homo sapiens protein ( H.sapiens mRNA ... 31 1.6
U26555-1|AAA67565.1| 1642|Homo sapiens versican V2 core protein ... 31 1.6
U16306-1|AAA65018.1| 3396|Homo sapiens chondroitin sulfate prote... 31 1.6
J02814-1|AAA36437.1| 688|Homo sapiens protein ( Human chondroit... 31 1.6
D32039-1|BAA06801.1| 655|Homo sapiens proteoglycan PG-M(V3) pro... 31 1.6
BX641036-1|CAE46022.1| 2060|Homo sapiens hypothetical protein pr... 31 1.6
AB209491-1|BAD92728.1| 3410|Homo sapiens chondroitin sulfate pro... 31 1.6
BX641140-1|CAE46062.1| 863|Homo sapiens hypothetical protein pr... 30 2.9
BC113587-1|AAI13588.1| 972|Homo sapiens chromosome 12 open read... 30 2.9
BC113585-1|AAI13586.1| 972|Homo sapiens chromosome 12 open read... 30 2.9
BC034357-1|AAH34357.1| 875|Homo sapiens C12orf30 protein protein. 30 2.9
AK023151-1|BAB14432.1| 852|Homo sapiens protein ( Homo sapiens ... 30 2.9
AB054990-1|BAC80174.1| 972|Homo sapiens P120 protein. 30 2.9
BC040704-1|AAH40704.1| 291|Homo sapiens C7orf27 protein protein. 29 6.6
BC023561-1|AAH23561.2| 582|Homo sapiens C7orf27 protein protein. 29 6.6
BC015632-1|AAH15632.2| 821|Homo sapiens chromosome 7 open readi... 29 6.6
BC007209-1|AAH07209.1| 662|Homo sapiens C7orf27 protein protein. 29 6.6
X13097-1|CAA31489.1| 291|Homo sapiens plasminogen activator pre... 28 8.7
X07393-1|CAA30302.1| 562|Homo sapiens protein ( Human fetal lun... 28 8.7
M18182-1|AAA36800.1| 562|Homo sapiens protein ( Human plasminog... 28 8.7
M15518-1|AAA60111.1| 562|Homo sapiens tissue-type plasminogen a... 28 8.7
L00153-1|AAB59510.1| 562|Homo sapiens plasminogen activator pro... 28 8.7
K03021-1|AAA98809.1| 562|Homo sapiens plasminogen activator pro... 28 8.7
D01096-1|BAA00881.1| 532|Homo sapiens tissue plasminogen activa... 28 8.7
BT007060-1|AAP35709.1| 562|Homo sapiens plasminogen activator, ... 28 8.7
BC095403-1|AAH95403.1| 562|Homo sapiens plasminogen activator, ... 28 8.7
BC018636-1|AAH18636.3| 562|Homo sapiens plasminogen activator, ... 28 8.7
BC013968-1|AAH13968.3| 562|Homo sapiens plasminogen activator, ... 28 8.7
BC007231-1|AAH07231.1| 562|Homo sapiens plasminogen activator, ... 28 8.7
BC002795-1|AAH02795.3| 516|Homo sapiens plasminogen activator, ... 28 8.7
AY291060-1|AAP34246.1| 291|Homo sapiens plasminogen activator, ... 28 8.7
AY221101-1|AAO34406.1| 562|Homo sapiens tissue plasminogen acti... 28 8.7
>X15998-1|CAA34128.1| 2409|Homo sapiens protein ( H.sapiens mRNA for
the chondroitin sulphate proteoglycan versican, V1
splice-variant; precursor peptide. ).
Length = 2409
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 48 MCILVYGNSEDDFCEIDSIE-QEDPCRRKVVCVLWLRTVHLISEPELDSVLSSKKTES 218
+C V G S D CE+D E +PCR CV T + P L + TE+
Sbjct: 2125 VCTCVPGYSGDQ-CELDFDECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTET 2181
>U26555-1|AAA67565.1| 1642|Homo sapiens versican V2 core protein
precursor protein.
Length = 1642
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 48 MCILVYGNSEDDFCEIDSIE-QEDPCRRKVVCVLWLRTVHLISEPELDSVLSSKKTES 218
+C V G S D CE+D E +PCR CV T + P L + TE+
Sbjct: 1358 VCTCVPGYSGDQ-CELDFDECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTET 1414
>U16306-1|AAA65018.1| 3396|Homo sapiens chondroitin sulfate
proteoglycan versican V0 splice-variant precursor peptide
protein.
Length = 3396
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 48 MCILVYGNSEDDFCEIDSIE-QEDPCRRKVVCVLWLRTVHLISEPELDSVLSSKKTES 218
+C V G S D CE+D E +PCR CV T + P L + TE+
Sbjct: 3112 VCTCVPGYSGDQ-CELDFDECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTET 3168
>J02814-1|AAA36437.1| 688|Homo sapiens protein ( Human chondroitin
sulfate proteoglycan core protein mRNA, 3' end. ).
Length = 688
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 48 MCILVYGNSEDDFCEIDSIE-QEDPCRRKVVCVLWLRTVHLISEPELDSVLSSKKTES 218
+C V G S D CE+D E +PCR CV T + P L + TE+
Sbjct: 404 VCTCVPGYSGDQ-CELDFDECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTET 460
>D32039-1|BAA06801.1| 655|Homo sapiens proteoglycan PG-M(V3)
protein.
Length = 655
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 48 MCILVYGNSEDDFCEIDSIE-QEDPCRRKVVCVLWLRTVHLISEPELDSVLSSKKTES 218
+C V G S D CE+D E +PCR CV T + P L + TE+
Sbjct: 371 VCTCVPGYSGDQ-CELDFDECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTET 427
>BX641036-1|CAE46022.1| 2060|Homo sapiens hypothetical protein
protein.
Length = 2060
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 48 MCILVYGNSEDDFCEIDSIE-QEDPCRRKVVCVLWLRTVHLISEPELDSVLSSKKTES 218
+C V G S D CE+D E +PCR CV T + P L + TE+
Sbjct: 1776 VCTCVPGYSGDQ-CELDFDECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTET 1832
>AB209491-1|BAD92728.1| 3410|Homo sapiens chondroitin sulfate
proteoglycan 2 (versican) variant protein.
Length = 3410
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 48 MCILVYGNSEDDFCEIDSIE-QEDPCRRKVVCVLWLRTVHLISEPELDSVLSSKKTES 218
+C V G S D CE+D E +PCR CV T + P L + TE+
Sbjct: 3126 VCTCVPGYSGDQ-CELDFDECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTET 3182
>BX641140-1|CAE46062.1| 863|Homo sapiens hypothetical protein
protein.
Length = 863
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 298 DCSSLSRNILRRASESGLFYGHSVTAFDSVFLLL 197
+C++LSR +L + S+ FY +T FDSVF L+
Sbjct: 251 ECNALSRRLLLKNSDDWQFY---LTYFDSVFRLI 281
>BC113587-1|AAI13588.1| 972|Homo sapiens chromosome 12 open reading
frame 30 protein.
Length = 972
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 298 DCSSLSRNILRRASESGLFYGHSVTAFDSVFLLL 197
+C++LSR +L + S+ FY +T FDSVF L+
Sbjct: 247 ECNALSRRLLLKNSDDWQFY---LTYFDSVFRLI 277
>BC113585-1|AAI13586.1| 972|Homo sapiens chromosome 12 open reading
frame 30 protein.
Length = 972
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 298 DCSSLSRNILRRASESGLFYGHSVTAFDSVFLLL 197
+C++LSR +L + S+ FY +T FDSVF L+
Sbjct: 247 ECNALSRRLLLKNSDDWQFY---LTYFDSVFRLI 277
>BC034357-1|AAH34357.1| 875|Homo sapiens C12orf30 protein protein.
Length = 875
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 298 DCSSLSRNILRRASESGLFYGHSVTAFDSVFLLL 197
+C++LSR +L + S+ FY +T FDSVF L+
Sbjct: 247 ECNALSRRLLLKNSDDWQFY---LTYFDSVFRLI 277
>AK023151-1|BAB14432.1| 852|Homo sapiens protein ( Homo sapiens
cDNA FLJ13089 fis, clone NT2RP3002108, weakly similar to
DEC1 PROTEIN. ).
Length = 852
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 298 DCSSLSRNILRRASESGLFYGHSVTAFDSVFLLL 197
+C++LSR +L + S+ FY +T FDSVF L+
Sbjct: 127 ECNALSRRLLLKNSDDWQFY---LTYFDSVFRLI 157
>AB054990-1|BAC80174.1| 972|Homo sapiens P120 protein.
Length = 972
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 298 DCSSLSRNILRRASESGLFYGHSVTAFDSVFLLL 197
+C++LSR +L + S+ FY +T FDSVF L+
Sbjct: 247 ECNALSRRLLLKNSDDWQFY---LTYFDSVFRLI 277
>BC040704-1|AAH40704.1| 291|Homo sapiens C7orf27 protein protein.
Length = 291
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/72 (22%), Positives = 30/72 (41%)
Frame = -1
Query: 325 LKLLHISKIDCSSLSRNILRRASESGLFYGHSVTAFDSVFLLLRTESSSGSDIRWTVLSH 146
L+LLHI +D R + + L GH+ A D+ + ++ D+ W V +
Sbjct: 64 LELLHILSVDSEGFPRRAVMQVFTEWLRDGHADAAQDTEQFVATVLQAASRDLDWEVRAQ 123
Query: 145 STQTTFLRHGSS 110
+ + G +
Sbjct: 124 GLELALVFLGQT 135
>BC023561-1|AAH23561.2| 582|Homo sapiens C7orf27 protein protein.
Length = 582
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/72 (22%), Positives = 30/72 (41%)
Frame = -1
Query: 325 LKLLHISKIDCSSLSRNILRRASESGLFYGHSVTAFDSVFLLLRTESSSGSDIRWTVLSH 146
L+LLHI +D R + + L GH+ A D+ + ++ D+ W V +
Sbjct: 355 LELLHILSVDSEGFPRRAVMQVFTEWLRDGHADAAQDTEQFVATVLQAASRDLDWEVRAQ 414
Query: 145 STQTTFLRHGSS 110
+ + G +
Sbjct: 415 GLELALVFLGQT 426
>BC015632-1|AAH15632.2| 821|Homo sapiens chromosome 7 open reading
frame 27 protein.
Length = 821
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/72 (22%), Positives = 30/72 (41%)
Frame = -1
Query: 325 LKLLHISKIDCSSLSRNILRRASESGLFYGHSVTAFDSVFLLLRTESSSGSDIRWTVLSH 146
L+LLHI +D R + + L GH+ A D+ + ++ D+ W V +
Sbjct: 594 LELLHILSVDSEGFPRRAVMQVFTEWLRDGHADAAQDTEQFVATVLQAASRDLDWEVRAQ 653
Query: 145 STQTTFLRHGSS 110
+ + G +
Sbjct: 654 GLELALVFLGQT 665
>BC007209-1|AAH07209.1| 662|Homo sapiens C7orf27 protein protein.
Length = 662
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/72 (22%), Positives = 30/72 (41%)
Frame = -1
Query: 325 LKLLHISKIDCSSLSRNILRRASESGLFYGHSVTAFDSVFLLLRTESSSGSDIRWTVLSH 146
L+LLHI +D R + + L GH+ A D+ + ++ D+ W V +
Sbjct: 435 LELLHILSVDSEGFPRRAVMQVFTEWLRDGHADAAQDTEQFVATVLQAASRDLDWEVRAQ 494
Query: 145 STQTTFLRHGSS 110
+ + G +
Sbjct: 495 GLELALVFLGQT 506
>X13097-1|CAA31489.1| 291|Homo sapiens plasminogen activator
preprotein protein.
Length = 291
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 91 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 119
>X07393-1|CAA30302.1| 562|Homo sapiens protein ( Human fetal lung
plasminogen activator (t-PA) mRNA (EC 3.4.21.31). ).
Length = 562
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 91 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 119
>M18182-1|AAA36800.1| 562|Homo sapiens protein ( Human plasminogen
activator mRNA, complete cds. ).
Length = 562
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 91 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 119
>M15518-1|AAA60111.1| 562|Homo sapiens tissue-type plasminogen
activator protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 91 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 119
>L00153-1|AAB59510.1| 562|Homo sapiens plasminogen activator
protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 91 CFTGGTCQQALYFSDFVCQCPEGFAGKCC 119
>K03021-1|AAA98809.1| 562|Homo sapiens plasminogen activator
protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 91 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 119
>D01096-1|BAA00881.1| 532|Homo sapiens tissue plasminogen activator
protein.
Length = 532
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 61 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 89
>BT007060-1|AAP35709.1| 562|Homo sapiens plasminogen activator,
tissue protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 91 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 119
>BC095403-1|AAH95403.1| 562|Homo sapiens plasminogen activator,
tissue protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 91 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 119
>BC018636-1|AAH18636.3| 562|Homo sapiens plasminogen activator,
tissue protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 91 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 119
>BC013968-1|AAH13968.3| 562|Homo sapiens plasminogen activator,
tissue protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 91 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 119
>BC007231-1|AAH07231.1| 562|Homo sapiens plasminogen activator,
tissue protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 91 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 119
>BC002795-1|AAH02795.3| 516|Homo sapiens plasminogen activator,
tissue protein.
Length = 516
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 45 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 73
>AY291060-1|AAP34246.1| 291|Homo sapiens plasminogen activator,
tissue type isoform 2 precursor protein.
Length = 291
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 91 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 119
>AY221101-1|AAO34406.1| 562|Homo sapiens tissue plasminogen
activator protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 274 CFSKGYCSQSLIYEE-ASDCPEG--NDCC 351
CF+ G C Q+L + + CPEG CC
Sbjct: 91 CFNGGTCQQALYFSDFVCQCPEGFAGKCC 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,808,801
Number of Sequences: 237096
Number of extensions: 1142744
Number of successful extensions: 2882
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2882
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -