Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30847.Seq
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040695-1|AAH40695.1| 358|Homo sapiens WBSCR16 protein protein. 58 2e-08
BC032712-1|AAH32712.1| 454|Homo sapiens WBSCR16 protein protein. 58 2e-08
BC019008-1|AAH19008.1| 464|Homo sapiens Williams-Beuren syndrom... 58 2e-08
BC007823-1|AAH07823.1| 464|Homo sapiens Williams-Beuren syndrom... 58 2e-08
AF410455-1|AAM62304.1| 464|Homo sapiens RCC1-like G exchanging ... 58 2e-08
AY337518-1|AAR00320.1| 1024|Homo sapiens HECT E3 ubiquitin ligas... 30 6.9
AB027289-1|BAA88519.1| 1024|Homo sapiens cyclin-E binding protei... 30 6.9
>BC040695-1|AAH40695.1| 358|Homo sapiens WBSCR16 protein protein.
Length = 358
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +2
Query: 257 VWGFAETGALGIH---LPRXXXXXXXXXXXXXLVWH-PMRSSFAERFDITNIACGYGFTV 424
VWGF+ +GALG+ +P + P R ++ I++ ACGYGFT+
Sbjct: 63 VWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQK--ISSAACGYGFTL 120
Query: 425 ASIKTSEQHKVFGTGINTDSQIGYHSPRE 511
S KT++ KV+G G+N DSQ+G+H R+
Sbjct: 121 LSSKTADVTKVWGMGLNKDSQLGFHRSRK 149
Score = 30.7 bits (66), Expect = 5.2
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 523 ELLLSYAPIYIPY-KSLECEIKAVAAGRAHTIILTDK 630
E +L +P+ +P + E + V+ GRAH+++LTD+
Sbjct: 156 EYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDR 192
>BC032712-1|AAH32712.1| 454|Homo sapiens WBSCR16 protein protein.
Length = 454
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +2
Query: 257 VWGFAETGALGIH---LPRXXXXXXXXXXXXXLVWH-PMRSSFAERFDITNIACGYGFTV 424
VWGF+ +GALG+ +P + P R ++ I++ ACGYGFT+
Sbjct: 63 VWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQK--ISSAACGYGFTL 120
Query: 425 ASIKTSEQHKVFGTGINTDSQIGYHSPRE 511
S KT++ KV+G G+N DSQ+G+H R+
Sbjct: 121 LSSKTADVTKVWGMGLNKDSQLGFHRSRK 149
Score = 30.7 bits (66), Expect = 5.2
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 523 ELLLSYAPIYIPY-KSLECEIKAVAAGRAHTIILTDK 630
E +L +P+ +P + E + V+ GRAH+++LTD+
Sbjct: 156 EYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDR 192
>BC019008-1|AAH19008.1| 464|Homo sapiens Williams-Beuren syndrome
chromosome region 16 protein.
Length = 464
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +2
Query: 257 VWGFAETGALGIH---LPRXXXXXXXXXXXXXLVWH-PMRSSFAERFDITNIACGYGFTV 424
VWGF+ +GALG+ +P + P R ++ I++ ACGYGFT+
Sbjct: 63 VWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQK--ISSAACGYGFTL 120
Query: 425 ASIKTSEQHKVFGTGINTDSQIGYHSPRE 511
S KT++ KV+G G+N DSQ+G+H R+
Sbjct: 121 LSSKTADVTKVWGMGLNKDSQLGFHRSRK 149
Score = 30.7 bits (66), Expect = 5.2
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 523 ELLLSYAPIYIPY-KSLECEIKAVAAGRAHTIILTDK 630
E +L +P+ +P + E + V+ GRAH+++LTD+
Sbjct: 156 EYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDR 192
>BC007823-1|AAH07823.1| 464|Homo sapiens Williams-Beuren syndrome
chromosome region 16 protein.
Length = 464
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +2
Query: 257 VWGFAETGALGIH---LPRXXXXXXXXXXXXXLVWH-PMRSSFAERFDITNIACGYGFTV 424
VWGF+ +GALG+ +P + P R ++ I++ ACGYGFT+
Sbjct: 63 VWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQK--ISSAACGYGFTL 120
Query: 425 ASIKTSEQHKVFGTGINTDSQIGYHSPRE 511
S KT++ KV+G G+N DSQ+G+H R+
Sbjct: 121 LSSKTADVTKVWGMGLNKDSQLGFHRSRK 149
Score = 30.7 bits (66), Expect = 5.2
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 523 ELLLSYAPIYIPY-KSLECEIKAVAAGRAHTIILTDK 630
E +L +P+ +P + E + V+ GRAH+++LTD+
Sbjct: 156 EYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDR 192
>AF410455-1|AAM62304.1| 464|Homo sapiens RCC1-like G exchanging
factor-like protein protein.
Length = 464
Score = 58.4 bits (135), Expect = 2e-08
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +2
Query: 257 VWGFAETGALGIH---LPRXXXXXXXXXXXXXLVWH-PMRSSFAERFDITNIACGYGFTV 424
VWGF+ +GALG+ +P + P R ++ I++ ACGYGFT+
Sbjct: 63 VWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQK--ISSAACGYGFTL 120
Query: 425 ASIKTSEQHKVFGTGINTDSQIGYHSPRE 511
S KT++ KV+G G+N DSQ+G+H R+
Sbjct: 121 LSSKTADVTKVWGMGLNKDSQLGFHRSRK 149
Score = 30.7 bits (66), Expect = 5.2
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 523 ELLLSYAPIYIPY-KSLECEIKAVAAGRAHTIILTDK 630
E +L +P+ +P + E + V+ GRAH+++LTD+
Sbjct: 156 EYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDR 192
>AY337518-1|AAR00320.1| 1024|Homo sapiens HECT E3 ubiquitin ligase
protein.
Length = 1024
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 383 FDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPREIIL 520
+ +T IACG T+A + S+ KVF G D Q+G R+ ++
Sbjct: 295 YRVTQIACGRWHTLAYV--SDLGKVFSFGSGKDGQLGNGGTRDQLM 338
>AB027289-1|BAA88519.1| 1024|Homo sapiens cyclin-E binding protein 1
protein.
Length = 1024
Score = 30.3 bits (65), Expect = 6.9
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 383 FDITNIACGYGFTVASIKTSEQHKVFGTGINTDSQIGYHSPREIIL 520
+ +T IACG T+A + S+ KVF G D Q+G R+ ++
Sbjct: 295 YRVTQIACGRWHTLAYV--SDLGKVFSFGSGKDGQLGNGGTRDQLM 338
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,040,408
Number of Sequences: 237096
Number of extensions: 2228988
Number of successful extensions: 4760
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4760
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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