Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30846.Seq
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6F439 Cluster: Ribosomal protein L7; n=2; Coelomata|Re... 111 2e-23
UniRef50_P32100 Cluster: 60S ribosomal protein L7; n=39; Fungi/M... 80 6e-14
UniRef50_UPI0000DA2F9D Cluster: PREDICTED: similar to 60S riboso... 79 1e-13
UniRef50_Q7SBD5 Cluster: 60S ribosomal protein L7; n=5; Eukaryot... 79 1e-13
UniRef50_P18124 Cluster: 60S ribosomal protein L7; n=124; Eukary... 79 1e-13
UniRef50_UPI0001554D2F Cluster: PREDICTED: hypothetical protein,... 72 1e-11
UniRef50_P17937 Cluster: 60S ribosomal protein L7-A; n=3; Ascomy... 71 3e-11
UniRef50_Q7QZV2 Cluster: GLP_609_14821_14114; n=1; Giardia lambl... 62 1e-08
UniRef50_Q22G42 Cluster: Ribosomal protein L30p/L7e containing p... 61 2e-08
UniRef50_Q6CS71 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 59 9e-08
UniRef50_Q12213 Cluster: 60S ribosomal protein L7-B; n=46; Eukar... 59 1e-07
UniRef50_Q4Q9H4 Cluster: 60S ribosomal protein L7, putative; n=9... 58 2e-07
UniRef50_UPI00004988A2 Cluster: 60S ribosomal protein L7; n=5; E... 54 3e-06
UniRef50_A0DG29 Cluster: Chromosome undetermined scaffold_5, who... 54 3e-06
UniRef50_Q5CVE6 Cluster: 60S ribosomal protein L7; n=2; Cryptosp... 53 8e-06
UniRef50_A2F592 Cluster: Ribosomal protein L30p/L7e, putative; n... 52 1e-05
UniRef50_O97250 Cluster: 60S ribosomal protein L7, putative; n=6... 50 7e-05
UniRef50_Q98S26 Cluster: 60S ribosomal protein L7; n=1; Guillard... 49 1e-04
UniRef50_A7R8B0 Cluster: Chromosome undetermined scaffold_2403, ... 48 3e-04
UniRef50_Q9SAI5 Cluster: 60S ribosomal protein L7-1; n=7; Magnol... 47 4e-04
UniRef50_Q6DKI1 Cluster: Ribosomal protein L7-like 1; n=40; Eute... 47 5e-04
UniRef50_P32101 Cluster: Ribosome biogenesis protein RLP7; n=1; ... 43 0.008
UniRef50_Q173X9 Cluster: Putative uncharacterized protein; n=4; ... 42 0.015
UniRef50_A3F4R1 Cluster: Ribosomal protein L7-like protein; n=1;... 41 0.025
UniRef50_Q8SS93 Cluster: 60S ribosomal protein L7; n=1; Encephal... 41 0.025
UniRef50_Q6BIF5 Cluster: Ribosome biogenesis protein RLP7; n=2; ... 40 0.044
UniRef50_P40693 Cluster: Ribosome biogenesis protein RLP7; n=5; ... 40 0.059
UniRef50_Q8I3F8 Cluster: Putative uncharacterized protein PFE155... 37 0.55
UniRef50_Q0IGW8 Cluster: LP23547p; n=1; Drosophila melanogaster|... 36 1.3
UniRef50_Q24DI0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_Q75ET5 Cluster: Ribosome biogenesis protein RLP7; n=1; ... 33 5.1
UniRef50_Q73PP8 Cluster: Cobalamin biosynthesis protein CobN, pu... 33 6.7
UniRef50_A2DPG4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q8A0F2 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_Q00U40 Cluster: Chromosome 16 contig 1, DNA sequence; n... 33 8.9
UniRef50_Q23180 Cluster: Putative uncharacterized protein W06A11... 33 8.9
>UniRef50_Q6F439 Cluster: Ribosomal protein L7; n=2; Coelomata|Rep:
Ribosomal protein L7 - Plutella xylostella (Diamondback
moth)
Length = 213
Score = 111 bits (267), Expect = 2e-23
Identities = 52/60 (86%), Positives = 56/60 (93%)
Frame = +3
Query: 246 QEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
++ + IFKRAE YVKEYRI+ERDEIRLARQARN GNYYVPGEAKLAFVIRIRGINQVSPK
Sbjct: 53 KKRKTIFKRAEAYVKEYRIRERDEIRLARQARNNGNYYVPGEAKLAFVIRIRGINQVSPK 112
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVR 568
+VRKVLQ+FR+RQINNGVFVRLNKATVNM G+P + R
Sbjct: 112 KVRKVLQVFRVRQINNGVFVRLNKATVNMMRIAEPLHHVGVPQPEERAR 160
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = +1
Query: 115 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXXXXXXXXXSSAIKKK 255
PVKGKEDSKKLPAVPESVLKH ++A+KK+
Sbjct: 9 PVKGKEDSKKLPAVPESVLKHRKRREALRTRRVQVTLKRRTAALKKR 55
>UniRef50_P32100 Cluster: 60S ribosomal protein L7; n=39;
Fungi/Metazoa group|Rep: 60S ribosomal protein L7 -
Drosophila melanogaster (Fruit fly)
Length = 252
Score = 79.8 bits (188), Expect = 6e-14
Identities = 45/92 (48%), Positives = 56/92 (60%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXNVGFRQ 601
+VRKVLQLFRLRQINNGVF++LNKAT+NM WG P KSVREL+ +
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGY-PNLKSVRELIYKRGFVKH 165
Query: 602 AELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
IT++F + R+ H I CVEDL+
Sbjct: 166 NRQRVPITDNF--VIERKLRQAHQIQCVEDLV 195
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = +3
Query: 252 EREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
++E RAE+Y EY E+ EI+L R A+ R +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 50 KKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPK 107
>UniRef50_UPI0000DA2F9D Cluster: PREDICTED: similar to 60S ribosomal
protein L7; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L7 - Rattus norvegicus
Length = 389
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/63 (61%), Positives = 45/63 (71%)
Frame = +3
Query: 261 IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFC 440
I+++A+ Y KEYR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPK K
Sbjct: 283 IYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVL 342
Query: 441 NCL 449
L
Sbjct: 343 QLL 345
Score = 56.4 bits (130), Expect = 6e-07
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELV 577
+VRKVLQL RL+QI NG FV+LNKA+VNM AWG P KSV +L+
Sbjct: 337 KVRKVLQLLRLQQIFNGTFVKLNKASVNMLRIVEPYIAWGY-PNLKSVNKLI 387
>UniRef50_Q7SBD5 Cluster: 60S ribosomal protein L7; n=5;
Eukaryota|Rep: 60S ribosomal protein L7 - Neurospora
crassa
Length = 248
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/70 (54%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Frame = +3
Query: 243 HQEERE-IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVS 419
++E+R IFKRAE YVKEYR ER++IRL R A+ G++++P EAKL F+IRI+GIN++
Sbjct: 42 NKEKRAVIFKRAETYVKEYRDVEREKIRLQRAAKQDGSFHIPAEAKLIFLIRIKGINKIP 101
Query: 420 PKSVKFCNCL 449
PK K L
Sbjct: 102 PKPRKILQLL 111
Score = 62.5 bits (145), Expect = 1e-08
Identities = 39/90 (43%), Positives = 52/90 (57%)
Frame = +2
Query: 428 RKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXNVGFRQAE 607
RK+LQL RL QINNGVFVR+ KAT M A+G P KSV+EL+ G+ +
Sbjct: 105 RKILQLLRLLQINNGVFVRVTKATAEMIKIVEPWVAYGY-PNLKSVKELIYKR-GYGKVN 162
Query: 608 LDQRITNHFPTALLRRRFHKHNIICVEDLI 697
QR+ +++ K+ IIC+EDLI
Sbjct: 163 -KQRVA-LTDNSIIEENLGKYGIICMEDLI 190
>UniRef50_P18124 Cluster: 60S ribosomal protein L7; n=124;
Eukaryota|Rep: 60S ribosomal protein L7 - Homo sapiens
(Human)
Length = 248
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/63 (61%), Positives = 45/63 (71%)
Frame = +3
Query: 261 IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFC 440
I+++A+ Y KEYR R EIR+AR AR GN+YVP E KLAFVIRIRGIN VSPK K
Sbjct: 50 IYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVL 109
Query: 441 NCL 449
L
Sbjct: 110 QLL 112
Score = 72.5 bits (170), Expect = 9e-12
Identities = 43/92 (46%), Positives = 57/92 (61%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXNVGFRQ 601
+VRKVLQL RLRQI NG FV+LNKA++NM AWG P KSV EL+ G+
Sbjct: 104 KVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGY-PNLKSVNELIYKR-GY-- 159
Query: 602 AELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
+++++ AL+ R K+ IIC+EDLI
Sbjct: 160 GKINKKRIALTDNALIARSLGKYGIICMEDLI 191
>UniRef50_UPI0001554D2F Cluster: PREDICTED: hypothetical protein,
partial; n=2; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein, partial - Ornithorhynchus anatinus
Length = 193
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/52 (67%), Positives = 39/52 (75%)
Frame = +3
Query: 249 EEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRG 404
+ + I+KRAE Y KEYR R EIR+AR AR GNYYVP E KLAFVIRIRG
Sbjct: 5 QRKVIYKRAEAYHKEYRQMYRREIRMARMARKVGNYYVPAEPKLAFVIRIRG 56
>UniRef50_P17937 Cluster: 60S ribosomal protein L7-A; n=3;
Ascomycota|Rep: 60S ribosomal protein L7-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 249
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = +3
Query: 246 QEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
+ +E FKRAE ++ YR +ER+ IRL R A+N+G+ +VP E KL FVIRI G+ + PK
Sbjct: 45 KNRKETFKRAETFINNYRQRERERIRLNRSAKNKGDIFVPDETKLLFVIRIAGVKNMPPK 104
Query: 426 SVKFCNCL 449
K L
Sbjct: 105 IRKVLRLL 112
Score = 55.6 bits (128), Expect = 1e-06
Identities = 38/92 (41%), Positives = 51/92 (55%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXNVGFRQ 601
++RKVL+L RL +INN VFVR NKA M +GI P SVREL+ GF +
Sbjct: 104 KIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGI-PNLHSVRELIYKR-GFGK 161
Query: 602 AELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
QRI AL+ K+++I +ED+I
Sbjct: 162 IN-GQRIALS-DNALIEEALGKYDVISIEDII 191
>UniRef50_Q7QZV2 Cluster: GLP_609_14821_14114; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_609_14821_14114 - Giardia lamblia
ATCC 50803
Length = 235
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/92 (41%), Positives = 52/92 (56%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXNVGFRQ 601
+VR +L L RLRQINN VF+R NKAT+N +G PT +++R L+ GF +
Sbjct: 93 KVRTILSLLRLRQINNAVFMRCNKATLNALRIVDHYVTYG-EPTVETIRNLIYKR-GFAK 150
Query: 602 AELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
QRI L+ + KHNI+C EDL+
Sbjct: 151 VN-GQRIP-IVDNNLIDEQLSKHNILCAEDLV 180
Score = 37.5 bits (83), Expect = 0.31
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +3
Query: 267 KRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
K A+ Y + Y E + A YVP E K+ V+RIRGI V+PK
Sbjct: 41 KSAQVYARYYIDLVESEKKARENALKNNQLYVPDEPKVYLVVRIRGIVGVAPK 93
>UniRef50_Q22G42 Cluster: Ribosomal protein L30p/L7e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L30p/L7e containing protein -
Tetrahymena thermophila SB210
Length = 386
Score = 61.3 bits (142), Expect = 2e-08
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMY--VSPSLTFAWGIPPTXKSVRELVLXNVGF 595
+V++VL+LFRLRQ++NG F R+NKA++NM V P +TF + PT ++ +L+ GF
Sbjct: 242 DVKRVLRLFRLRQLHNGAFFRVNKASLNMIKRVLPFITFGY---PTRNTISKLIYKR-GF 297
Query: 596 RQAELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
+ QRI T ++ + K I CVEDLI
Sbjct: 298 AKVN-GQRIPLTDNT-IVEKSLGKFGITCVEDLI 329
Score = 42.3 bits (95), Expect = 0.011
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +3
Query: 333 QARNRGNYYVPGEAKLAFVIRIRGINQV 416
QAR G +YVP EAK+AF IRIRG QV
Sbjct: 174 QARKTGAFYVPAEAKVAFAIRIRGYKQV 201
>UniRef50_Q6CS71 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetaceae|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 255
Score = 59.3 bits (137), Expect = 9e-08
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +3
Query: 246 QEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
++ I +R Y KEY ER I R+A+ +YYV EAKL FV+RI+GIN++ PK
Sbjct: 50 EKRAAILERNAAYQKEYETAERAVIDAKREAKANSSYYVSAEAKLVFVVRIKGINKIPPK 109
Query: 426 SVKFCNCL 449
K L
Sbjct: 110 PRKVLQLL 117
Score = 46.4 bits (105), Expect = 7e-04
Identities = 33/90 (36%), Positives = 49/90 (54%)
Frame = +2
Query: 428 RKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXNVGFRQAE 607
RKVLQL RL QIN+G FV++ KAT + A+G P+ +VR+LV G+ +
Sbjct: 111 RKVLQLLRLNQINSGTFVKVTKATSELLKLIEPYVAYGY-PSYSTVRQLVYKR-GYGKIN 168
Query: 608 LDQRITNHFPTALLRRRFHKHNIICVEDLI 697
QRI +++ + I+ V+DLI
Sbjct: 169 -KQRIPLS-DNSIVEANLGNYGILSVDDLI 196
>UniRef50_Q12213 Cluster: 60S ribosomal protein L7-B; n=46;
Eukaryota|Rep: 60S ribosomal protein L7-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 244
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +3
Query: 243 HQEEREIF-KRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVS 419
++E+R I +R Y KEY ER+ I+ R A+ G+YYV + KL FV+RI+GIN++
Sbjct: 37 NKEKRAIILERNAAYQKEYETAERNIIQAKRDAKAAGSYYVEAQHKLVFVVRIKGINKIP 96
Query: 420 PKSVKFCNCL 449
PK K L
Sbjct: 97 PKPRKVLQLL 106
Score = 49.2 bits (112), Expect = 1e-04
Identities = 30/90 (33%), Positives = 52/90 (57%)
Frame = +2
Query: 428 RKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXNVGFRQAE 607
RKVLQL RL +IN+G FV++ KAT+ + A+G P+ ++R+LV GF +
Sbjct: 100 RKVLQLLRLTRINSGTFVKVTKATLELLKLIEPYVAYGY-PSYSTIRQLVYKR-GF--GK 155
Query: 608 LDQRITNHFPTALLRRRFHKHNIICVEDLI 697
++++ A++ K+ I+ ++DLI
Sbjct: 156 INKQRVPLSDNAIIEANLGKYGILSIDDLI 185
>UniRef50_Q4Q9H4 Cluster: 60S ribosomal protein L7, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein L7, putative
- Leishmania major
Length = 252
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +3
Query: 252 EREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSV 431
++ + RA +Y +EYR E+ + L RQA + GNYY+ + K+A V RIRGI +V+PK
Sbjct: 51 KKTAYLRARKYSREYRGAEKKLVTLRRQAASHGNYYLEAKPKVAVVTRIRGIAKVNPKQR 110
Query: 432 KFCNCL 449
K L
Sbjct: 111 KILQLL 116
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/90 (33%), Positives = 52/90 (57%)
Frame = +2
Query: 428 RKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXNVGFRQAE 607
RK+LQL RLRQI N VFV++NK NM + A+G P+ +VR +V +
Sbjct: 110 RKILQLLRLRQIFNTVFVKMNKPMENMLRAVEPYIAYGY-PSLATVRAMVYKRGYLKING 168
Query: 608 LDQRITNHFPTALLRRRFHKHNIICVEDLI 697
+IT++ +++ +++ +I+C ED++
Sbjct: 169 QRVKITDN---QMIKDKYNNVDIVCAEDMV 195
>UniRef50_UPI00004988A2 Cluster: 60S ribosomal protein L7; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L7 - Entamoeba histolytica HM-1:IMSS
Length = 230
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/94 (29%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNM--YVSPSLTFAWGIPPTXKSVRELVLXNVGF 595
+++K+L+L RLRQINN VF++ N +T+ M V P +T+ + PT ++V++L+
Sbjct: 86 KIKKILKLLRLRQINNAVFIKANASTIKMLRLVDPYVTYGY---PTLETVQKLIYKRGAL 142
Query: 596 RQAELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
+ IT++ ++++ +++CV+DL+
Sbjct: 143 KINGNRMPITSN---CMIKKALGDKDVVCVDDLV 173
Score = 39.5 bits (88), Expect = 0.078
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +3
Query: 240 CHQEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVS 419
C +E+ R + K+ ++ + A G+ Y + KL IRIRGIN VS
Sbjct: 25 CQAFRKEVILRTIKNHKDIEAAKKAVYTAKKNAEINGDLYAEADPKLIVAIRIRGINGVS 84
Query: 420 PKSVKFCNCL 449
PK K L
Sbjct: 85 PKIKKILKLL 94
>UniRef50_A0DG29 Cluster: Chromosome undetermined scaffold_5, whole
genome shotgun sequence; n=8; Alveolata|Rep: Chromosome
undetermined scaffold_5, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 329
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +3
Query: 267 KRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
K A+ Y EY+ +++ + R+A+ G +YVP E+KL V+RIRGIN ++P+
Sbjct: 133 KTAQAYENEYKAADKNLVDSLRKAKTEGGFYVPAESKLILVVRIRGINTLNPQ 185
Score = 44.8 bits (101), Expect = 0.002
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMY--VSPSLTFAWGIPPTXKSVRELVLXNVGF 595
+VR+ L+L +LRQ++N FVR+NKAT+ M V P +T+ + P+ ++ L+ G+
Sbjct: 185 QVRQTLRLLKLRQLHNAAFVRVNKATIEMIRKVEPYVTYGY---PSRAVIKNLIYKR-GY 240
Query: 596 RQAELDQR--ITNHFPTALLRRRFHKHNIICVEDLI 697
+ QR ITN+ ++ + K I +EDL+
Sbjct: 241 AKIN-GQRIPITNN---NIIEQSLGKVGIHSIEDLV 272
>UniRef50_Q5CVE6 Cluster: 60S ribosomal protein L7; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L7 -
Cryptosporidium parvum Iowa II
Length = 251
Score = 52.8 bits (121), Expect = 8e-06
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELV 577
+VRK+ QLFRLRQINNGVF+ LNKAT+ M A+G P+ +R+L+
Sbjct: 101 KVRKIFQLFRLRQINNGVFLPLNKATIEMLKVIDPFVAYGY-PSISMIRKLL 151
Score = 49.6 bits (113), Expect = 7e-05
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +3
Query: 288 KEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
K+Y+ + I L RQA+ G Y P E K+ FVIR++GIN++SPK
Sbjct: 56 KQYKEHVKSIIDLKRQAKQNGGLYRPAEPKVVFVIRLKGINKLSPK 101
>UniRef50_A2F592 Cluster: Ribosomal protein L30p/L7e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein
L30p/L7e, putative - Trichomonas vaginalis G3
Length = 239
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +3
Query: 252 EREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSP 422
E +I +RA++Y EY + + EI +A G +YVP EAK AFVIR +G N++ P
Sbjct: 38 EAKIQERAKKYAAEYVSQTKAEIDAENKATAEGAFYVPAEAKFAFVIRTKGTNKLHP 94
Score = 50.4 bits (115), Expect = 4e-05
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMY--VSPSLTFAWGIPPTXKSVRELV 577
+VRK+L LFRL Q +N +FVRLNKAT+ M V+P + F + P+ VR+L+
Sbjct: 95 DVRKILHLFRLNQKHNAIFVRLNKATIEMLKRVTPQVAFGY---PSVDMVRKLI 145
>UniRef50_O97250 Cluster: 60S ribosomal protein L7, putative; n=6;
Plasmodium|Rep: 60S ribosomal protein L7, putative -
Plasmodium falciparum (isolate 3D7)
Length = 257
Score = 49.6 bits (113), Expect = 7e-05
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNM--YVSPSLTFAWGIPPTXKSVRELVLXNVGF 595
+VR V +L RL Q++NGVFV++NKAT M V P +T+ + PT +VR+L+
Sbjct: 107 KVRSVFRLLRLLQVHNGVFVKVNKATKEMLKIVEPYVTYGY---PTLSTVRKLLYKRGYV 163
Query: 596 RQAELDQRITNHF-PTALLRRRFHKHNIICVEDLI 697
R ++ + A + + K+N+ +ED++
Sbjct: 164 RVGKVRRYARKKIQDNADISKHLGKYNVHGIEDMV 198
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/60 (33%), Positives = 37/60 (61%)
Frame = +3
Query: 246 QEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
++ ++ +R +Y +EY + + I L R+AR +Y E K+ FVIR++G+N++ PK
Sbjct: 48 KKRNDLRQRTLRYEEEYESERKKIIELKREARKNNCFYREAEKKVVFVIRLKGVNKLPPK 107
>UniRef50_Q98S26 Cluster: 60S ribosomal protein L7; n=1; Guillardia
theta|Rep: 60S ribosomal protein L7 - Guillardia theta
(Cryptomonas phi)
Length = 247
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +3
Query: 270 RAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 449
R E +KEY + IR+ + AR G Y+ ++ FVIR +GIN + PKS K L
Sbjct: 46 RIENIIKEYIDSSKKRIRIQKLARKEGKIYINKGPRILFVIRTKGINGIDPKSKKILKLL 105
Score = 47.6 bits (108), Expect = 3e-04
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Frame = +2
Query: 428 RKVLQLFRLRQINNGVFVRLNKATVNM--YVSPSLTFAWGIPPTXKSVRELVL----XNV 589
+K+L+L RL ++ GVF+++NK+ + + Y+ P + + + P+ K+VR L++ +
Sbjct: 99 KKILKLLRLNNVHAGVFLKINKSILKILQYIEPYVAYGY---PSIKNVRSLIMKKGFLKL 155
Query: 590 GFRQAELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
G R I N L+ +RF K I C EDL+
Sbjct: 156 GSRGHYNKISIAN---DVLIEQRFKKIGISCTEDLV 188
>UniRef50_A7R8B0 Cluster: Chromosome undetermined scaffold_2403,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2403, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 130
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +3
Query: 300 IKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 449
+++ + I+L +A+ +G +YV E KL F+IRIRGIN + PK+ K L
Sbjct: 1 MQQMEPIQLKHEAKLKGGFYVDPEVKLLFIIRIRGINAMHPKTRKILQLL 50
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/41 (53%), Positives = 32/41 (78%), Gaps = 2/41 (4%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMY--VSPSLTFAW 538
+ RK+LQL RLRQ+ NGVF+++NKAT+NM V P +T+ +
Sbjct: 42 KTRKILQLLRLRQMFNGVFLKVNKATMNMLHRVEPYVTYGY 82
>UniRef50_Q9SAI5 Cluster: 60S ribosomal protein L7-1; n=7;
Magnoliophyta|Rep: 60S ribosomal protein L7-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 247
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +3
Query: 267 KRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNC 446
KR E +V E+R KE D IR+ ++ + + P ++ L F+IRI+G N + PK+ + N
Sbjct: 50 KRPEDFVHEFRAKEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNN 109
Query: 447 L 449
L
Sbjct: 110 L 110
>UniRef50_Q6DKI1 Cluster: Ribosomal protein L7-like 1; n=40;
Euteleostomi|Rep: Ribosomal protein L7-like 1 - Homo
sapiens (Human)
Length = 246
Score = 46.8 bits (106), Expect = 5e-04
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 425 VRKVLQLFRLRQINNGVFVRLNKATVNM--YVSPSLTFAWGIPPTXKSVRELVLXNVGFR 598
V++ + RL++I +GVFV++ + M V P +T WG P KSVREL+L
Sbjct: 103 VQRTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVT--WGF-PNLKSVRELILKR---G 156
Query: 599 QAELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
QA++ + ++ K +IC+EDLI
Sbjct: 157 QAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLI 189
Score = 35.1 bits (77), Expect = 1.7
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 264 FKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVS 419
FKR E ++ + ++RD++RL R +P + LAFV+RI I+ VS
Sbjct: 49 FKRLESFLHDSWRQKRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVS 100
>UniRef50_P32101 Cluster: Ribosome biogenesis protein RLP7; n=1;
Pichia jadinii|Rep: Ribosome biogenesis protein RLP7 -
Pichia jadinii (Yeast) (Candida utilis)
Length = 212
Score = 42.7 bits (96), Expect = 0.008
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +2
Query: 419 TEVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELV--LXNVG 592
++V+KVLQL RL +IN+GVFV+L + TV + + P+ ++VR+LV V
Sbjct: 48 SKVQKVLQLLRLNKINSGVFVKLTE-TVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVT 106
Query: 593 FRQA-ELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
A + + R L+ + IIC+ED+I
Sbjct: 107 VTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDII 142
>UniRef50_Q173X9 Cluster: Putative uncharacterized protein; n=4;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 214
Score = 41.9 bits (94), Expect = 0.015
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELV 577
++ K LQLFRLRQIN+ F++LNKAT M ++ +G PT KSVR L+
Sbjct: 84 KICKELQLFRLRQINDATFIKLNKAT-KMRIAE----RYG-NPTLKSVRYLI 129
>UniRef50_A3F4R1 Cluster: Ribosomal protein L7-like protein; n=1;
Taenia asiatica|Rep: Ribosomal protein L7-like protein -
Taenia asiatica (Asian tapeworm)
Length = 207
Score = 41.1 bits (92), Expect = 0.025
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 267 KRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAF 386
+ A +++ EY+ + EI L R A+ GN+YVP E KLAF
Sbjct: 168 EHARKHLVEYKRAAKREISLMRSAQKAGNFYVPAEPKLAF 207
>UniRef50_Q8SS93 Cluster: 60S ribosomal protein L7; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L7 -
Encephalitozoon cuniculi
Length = 239
Score = 41.1 bits (92), Expect = 0.025
Identities = 31/92 (33%), Positives = 48/92 (52%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXNVGFRQ 601
+VRKVL+LFRL++IN V VR NK+T M A+G + +R+LV R
Sbjct: 96 KVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFG-TIGMELLRKLVYTKGSGRN 154
Query: 602 AELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
+ ++TN F + + I C+E+L+
Sbjct: 155 GHVRVKLTNEFIEDMFDGK-----IRCIEELV 181
>UniRef50_Q6BIF5 Cluster: Ribosome biogenesis protein RLP7; n=2;
Saccharomycetaceae|Rep: Ribosome biogenesis protein RLP7
- Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 275
Score = 40.3 bits (90), Expect = 0.044
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = +2
Query: 419 TEVRKVLQLFRLRQINNGVFVRLNKATVNM--YVSPSLTFAWGIPPTXKSVRELVLXNVG 592
++ RKVL L RL + N GVFV+L ATV + +SP + P+ S+R+L
Sbjct: 111 SKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAG---KPSLNSIRKLFQKRAC 167
Query: 593 FR---QAELDQRITNHFPTALLRRRFHKH-NIICVEDLI 697
+ + RIT ++ +F IC+EDLI
Sbjct: 168 ISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLI 206
>UniRef50_P40693 Cluster: Ribosome biogenesis protein RLP7; n=5;
Saccharomycetales|Rep: Ribosome biogenesis protein RLP7
- Saccharomyces cerevisiae (Baker's yeast)
Length = 322
Score = 39.9 bits (89), Expect = 0.059
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Frame = +2
Query: 431 KVLQLFRLRQINNGVFVRLNKATVNM--YVSPSLTFAWGIPPTXKSVRELV-----LXNV 589
K+L L RL + N GVFV+L K + ++P + P+ S+R L+ +
Sbjct: 161 KILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIG---KPSLSSIRSLIQKRGRIIYK 217
Query: 590 GFRQAELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
G +AE + + N ++ + H IICVED+I
Sbjct: 218 GENEAEPHEIVLN--DNNIVEEQLGDHGIICVEDII 251
>UniRef50_Q8I3F8 Cluster: Putative uncharacterized protein PFE1550w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFE1550w - Plasmodium falciparum
(isolate 3D7)
Length = 709
Score = 36.7 bits (81), Expect = 0.55
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 234 FFCHQEEREIFKRAEQYVKE--YRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGI 407
+ EE+EI R +Y + Y+ E +EI++ R ++ G YY+P E + + +IRI I
Sbjct: 137 YLTSNEEKEIILRKSKYASQKFYKANE-EEIKIIR--KSEGQYYLPIECENSTIIRIVNI 193
Query: 408 N 410
N
Sbjct: 194 N 194
>UniRef50_Q0IGW8 Cluster: LP23547p; n=1; Drosophila
melanogaster|Rep: LP23547p - Drosophila melanogaster
(Fruit fly)
Length = 227
Score = 35.5 bits (78), Expect = 1.3
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -2
Query: 508 HIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 419
H+ L+Q +HT+V L Q++QLQN D G
Sbjct: 62 HVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91
Score = 32.7 bits (71), Expect = 8.9
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 416 NLVDTTDSDDKCQFGFPGNVVVATIACLSG*SDFITF-LDAVFLDVL 279
+LVDT D+DDK QFG G+V + + + D F LD + L +L
Sbjct: 93 HLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLILVLL 139
>UniRef50_Q24DI0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 333
Score = 35.1 bits (77), Expect = 1.7
Identities = 23/92 (25%), Positives = 43/92 (46%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXNVGFRQ 601
E K+L+LF+L IN+ F+++N A + +G P+ K + EL+
Sbjct: 187 EQTKILRLFKLPTINSATFIKMNTANLRRLKRVENYVTYGY-PSRKVISELIYKRA---H 242
Query: 602 AELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
A+++ + + + IIC+EDL+
Sbjct: 243 AKINGKRVHLDNNKKVEDNLGNLGIICLEDLV 274
>UniRef50_Q75ET5 Cluster: Ribosome biogenesis protein RLP7; n=1;
Eremothecium gossypii|Rep: Ribosome biogenesis protein
RLP7 - Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 293
Score = 33.5 bits (73), Expect = 5.1
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Frame = +2
Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXN---VG 592
+ +VL L RL ++N GVFVRL A V + + P+ S+R LV V
Sbjct: 129 KAHRVLTLLRLAEVNTGVFVRLT-AEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVH 187
Query: 593 FRQAELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
R E ++ R +ICVED+I
Sbjct: 188 QRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDII 222
>UniRef50_Q73PP8 Cluster: Cobalamin biosynthesis protein CobN,
putative; n=1; Treponema denticola|Rep: Cobalamin
biosynthesis protein CobN, putative - Treponema denticola
Length = 1244
Score = 33.1 bits (72), Expect = 6.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 547 GYPPSKCKARRYVHIHSSLIQTYKHTIVYLAQSKQLQNFTDFGETWL 407
G P K + R V + S+ TY + L +SK+ QNF D E ++
Sbjct: 993 GIHPDKARDRASVRVFSAPSGTYGAGVANLIESKKWQNFEDLAEAYI 1039
>UniRef50_A2DPG4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 356
Score = 33.1 bits (72), Expect = 6.7
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 210 ITGYAXEAFFCHQEEREIFKRAEQYVKEYRIKER---DEIRLARQ 335
I GY HQ +REI K EQ K+Y K + D+I LAR+
Sbjct: 128 IQGYNKNKLIRHQSQREINKEIEQLRKKYETKRKKLVDKIWLARE 172
>UniRef50_Q8A0F2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides thetaiotaomicron|Rep: Putative
uncharacterized protein - Bacteroides thetaiotaomicron
Length = 534
Score = 32.7 bits (71), Expect = 8.9
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +3
Query: 219 YAXEAFFCHQEEREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRI 398
Y + HQ E + AEQY+ E I +A++ N+ Y + G +LAFV +
Sbjct: 66 YRLNSEILHQYETFVCDSAEQYINE-------NIEIAKKLDNK-TYLLEGRLQLAFVYSL 117
Query: 399 RGINQVSPKSVKFCNCLD 452
G+ + K NC D
Sbjct: 118 SGLFIQANDIFKSINCSD 135
>UniRef50_Q00U40 Cluster: Chromosome 16 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 16 contig 1, DNA
sequence - Ostreococcus tauri
Length = 447
Score = 32.7 bits (71), Expect = 8.9
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +3
Query: 222 AXEAFFCHQEER-EIFKRAEQYVKEYRIKER 311
A EA + +R EIFKRAE+YVKEYR + R
Sbjct: 294 AAEAKKAQEAKRDEIFKRAEKYVKEYRDQVR 324
>UniRef50_Q23180 Cluster: Putative uncharacterized protein W06A11.4;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein W06A11.4 - Caenorhabditis
elegans
Length = 347
Score = 32.7 bits (71), Expect = 8.9
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +1
Query: 247 KKKGKSSRGLNSTSRNTASRNVMKSD*PDKHAIVATTTFPGKPNWHLSSESVVSTKFHRS 426
KK+ K SR SR ASR +K K A +T P +PN + S S S ++ +
Sbjct: 21 KKRRKMSRKFTKKSRKRASRASIKLANEQKAKKYANSTVPMEPNVYTDSGSPFSNRYASN 80
Query: 427 P*SSATV*TAP 459
S + + P
Sbjct: 81 RSSQVKIRSVP 91
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,020,180
Number of Sequences: 1657284
Number of extensions: 11745142
Number of successful extensions: 28188
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 27394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28171
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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