Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30846.Seq
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal  pro...    80   3e-15
AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p pro...    80   3e-15
AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA...    80   3e-15
BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p pro...    36   0.070

>X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal
           protein protein.
          Length = 239

 Score = 79.8 bits (188), Expect = 3e-15
 Identities = 45/92 (48%), Positives = 56/92 (60%)
 Frame = +2

Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXNVGFRQ 601
           +VRKVLQLFRLRQINNGVF++LNKAT+NM         WG  P  KSVREL+      + 
Sbjct: 94  KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGY-PNLKSVRELIYKRGFVKH 152

Query: 602 AELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
                 IT++F   + R+    H I CVEDL+
Sbjct: 153 NRQRVPITDNF--VIERKLRQAHQIQCVEDLV 182



 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 33/58 (56%), Positives = 43/58 (74%)
 Frame = +3

Query: 252 EREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
           ++E   RAE+Y  EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 37  KKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPK 94


>AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p
           protein.
          Length = 252

 Score = 79.8 bits (188), Expect = 3e-15
 Identities = 45/92 (48%), Positives = 56/92 (60%)
 Frame = +2

Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXNVGFRQ 601
           +VRKVLQLFRLRQINNGVF++LNKAT+NM         WG  P  KSVREL+      + 
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGY-PNLKSVRELIYKRGFVKH 165

Query: 602 AELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
                 IT++F   + R+    H I CVEDL+
Sbjct: 166 NRQRVPITDNF--VIERKLRQAHQIQCVEDLV 195



 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 33/58 (56%), Positives = 43/58 (74%)
 Frame = +3

Query: 252 EREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
           ++E   RAE+Y  EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 50  KKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPK 107



 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +1

Query: 115 PVKGKEDSKKLPAVPESVLK 174
           PV  K  +KKLPAVPES LK
Sbjct: 4   PVVKKPAAKKLPAVPESKLK 23


>AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA
           protein.
          Length = 252

 Score = 79.8 bits (188), Expect = 3e-15
 Identities = 45/92 (48%), Positives = 56/92 (60%)
 Frame = +2

Query: 422 EVRKVLQLFRLRQINNGVFVRLNKATVNMYVSPSLTFAWGIPPTXKSVRELVLXNVGFRQ 601
           +VRKVLQLFRLRQINNGVF++LNKAT+NM         WG  P  KSVREL+      + 
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGY-PNLKSVRELIYKRGFVKH 165

Query: 602 AELDQRITNHFPTALLRRRFHKHNIICVEDLI 697
                 IT++F   + R+    H I CVEDL+
Sbjct: 166 NRQRVPITDNF--VIERKLRQAHQIQCVEDLV 195



 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 33/58 (56%), Positives = 43/58 (74%)
 Frame = +3

Query: 252 EREIFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 425
           ++E   RAE+Y  EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 50  KKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPK 107



 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +1

Query: 115 PVKGKEDSKKLPAVPESVLK 174
           PV  K  +KKLPAVPES LK
Sbjct: 4   PVVKKPAAKKLPAVPESKLK 23


>BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p
           protein.
          Length = 227

 Score = 35.5 bits (78), Expect = 0.070
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 508 HIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 419
           H+   L+Q  +HT+V L Q++QLQN  D G
Sbjct: 62  HVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91



 Score = 32.7 bits (71), Expect = 0.49
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -1

Query: 416 NLVDTTDSDDKCQFGFPGNVVVATIACLSG*SDFITF-LDAVFLDVL 279
           +LVDT D+DDK QFG  G+V +  +   +   D   F LD + L +L
Sbjct: 93  HLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLILVLL 139


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,084,937
Number of Sequences: 53049
Number of extensions: 550723
Number of successful extensions: 1264
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)