Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30844.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    27   0.46 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    27   0.46 
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    27   0.46 
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    26   0.80 
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   2.5  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    24   3.2  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   3.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.5  

>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 216 AGEGAQKEDQRSRKENKGKPEPKPAKGVTVPTRK 317
           A EGA K  ++    ++G+P PKP + +T  T++
Sbjct: 130 AAEGAPKPQRKL--SDRGEPPPKPDRRITTTTQQ 161


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 297 VTVPTRKGIKETQNVKSQDITKWRTTEG*GTCTPG 401
           VT+PT    + T     QD+ KW +TE  G  T G
Sbjct: 123 VTIPTHSHFQPTA---VQDLRKWTSTEAIGDVTTG 154


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 297 VTVPTRKGIKETQNVKSQDITKWRTTEG*GTCTPG 401
           VT+PT    + T     QD+ KW +TE  G  T G
Sbjct: 124 VTIPTHSHFQPTA---VQDLRKWTSTEAIGDVTTG 155


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 26.2 bits (55), Expect = 0.80
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 368 SPLXDVLRLHILSFLNALPGGNGYAFSGLGFR 273
           S     LRLH + F++    G GYAF    F+
Sbjct: 768 SAFLHTLRLHWVEFMSKFYEGLGYAFKPFSFK 799


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 368 SPLXDVLRLHILSFLNALPGGNGYAFSGLGFR 273
           S     LRLH + F++    G GY F    F+
Sbjct: 808 SAFLHTLRLHWVEFMSKFYEGLGYGFQPFSFK 839


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 228 AQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQN 338
           AQ +D++ R  N+G+  P+P   + +P    +K+ ++
Sbjct: 89  AQTQDEQ-RALNEGEVPPEPVANIHIPKLSELKDLKH 124


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 228 AQKEDQRSRKENKGKPEPKPAKGVTVPTRKGIKETQN 338
           AQ +D++ R  N+G+  P+P   + +P    +K+ ++
Sbjct: 89  AQTQDEQ-RALNEGEVPPEPVANIHIPKLSELKDLKH 124


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -2

Query: 558  FVVVKIAALVEVRPDDRKLASRWSAELLPXFCGT 457
            F  V +  +     DD KL+  W+ +    FC T
Sbjct: 1595 FESVALRFVYNTSVDDSKLSFSWNGQEFNLFCST 1628


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,734
Number of Sequences: 2352
Number of extensions: 8888
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)