Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30843.Seq
(439 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for ... 120 3e-27
BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31 p... 120 3e-27
BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein. 120 3e-27
BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31 p... 120 3e-27
AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein. 120 3e-27
AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31 p... 120 3e-27
X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31 pro... 118 9e-27
AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31 p... 54 2e-07
BC060867-1|AAH60867.1| 979|Homo sapiens KIAA0746 protein protein. 29 9.3
BC009945-1|AAH09945.2| 702|Homo sapiens KIAA0746 protein protein. 29 9.3
AB018289-1|BAA34466.1| 1029|Homo sapiens KIAA0746 protein protein. 29 9.3
>X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for
ribosomal protein L31. ).
Length = 125
Score = 120 bits (288), Expect = 3e-27
Identities = 54/68 (79%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
Frame = +2
Query: 56 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 233 VDTRLNKS 256
+DTRLNK+
Sbjct: 64 IDTRLNKA 71
Score = 68.9 bits (161), Expect = 7e-12
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 411
L + +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 68 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 120 bits (288), Expect = 3e-27
Identities = 54/68 (79%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
Frame = +2
Query: 56 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 233 VDTRLNKS 256
+DTRLNK+
Sbjct: 64 IDTRLNKA 71
Score = 68.9 bits (161), Expect = 7e-12
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 411
L + +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 68 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein.
Length = 121
Score = 120 bits (288), Expect = 3e-27
Identities = 54/68 (79%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
Frame = +2
Query: 56 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 233 VDTRLNKS 256
+DTRLNK+
Sbjct: 64 IDTRLNKA 71
Score = 57.6 bits (133), Expect = 2e-08
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIK 387
L + +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K
Sbjct: 68 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFK 115
>BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 120 bits (288), Expect = 3e-27
Identities = 54/68 (79%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
Frame = +2
Query: 56 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 233 VDTRLNKS 256
+DTRLNK+
Sbjct: 64 IDTRLNKA 71
Score = 68.9 bits (161), Expect = 7e-12
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 411
L + +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 68 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 120 bits (288), Expect = 3e-27
Identities = 54/68 (79%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
Frame = +2
Query: 56 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 233 VDTRLNKS 256
+DTRLNK+
Sbjct: 64 IDTRLNKA 71
Score = 68.9 bits (161), Expect = 7e-12
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 411
L + +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 68 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 120 bits (288), Expect = 3e-27
Identities = 54/68 (79%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
Frame = +2
Query: 56 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 232
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 233 VDTRLNKS 256
+DTRLNK+
Sbjct: 64 IDTRLNKA 71
Score = 68.9 bits (161), Expect = 7e-12
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 411
L + +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 68 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31
protein.
Length = 121
Score = 118 bits (284), Expect = 9e-27
Identities = 53/67 (79%), Positives = 63/67 (94%), Gaps = 1/67 (1%)
Frame = +2
Query: 59 KPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 235
K GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+
Sbjct: 1 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 60
Query: 236 DTRLNKS 256
DTRLNK+
Sbjct: 61 DTRLNKA 67
Score = 68.9 bits (161), Expect = 7e-12
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 244 LKQILWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 411
L + +W+KG+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 64 LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 119
>AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31
protein.
Length = 47
Score = 54.4 bits (125), Expect = 2e-07
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 277 NVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 411
NVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 1 NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 45
>BC060867-1|AAH60867.1| 979|Homo sapiens KIAA0746 protein protein.
Length = 979
Score = 28.7 bits (61), Expect = 9.3
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 47 ITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVG-----FKKRAPRAIKEIRKFAEKQ 211
I + K +G +K + E++ + + LH+ ++G+G FKK +A K K ++
Sbjct: 582 IVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFKKNYAKAAKYWLK--AEE 639
Query: 212 MGTPD 226
MG PD
Sbjct: 640 MGNPD 644
>BC009945-1|AAH09945.2| 702|Homo sapiens KIAA0746 protein protein.
Length = 702
Score = 28.7 bits (61), Expect = 9.3
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 47 ITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVG-----FKKRAPRAIKEIRKFAEKQ 211
I + K +G +K + E++ + + LH+ ++G+G FKK +A K K ++
Sbjct: 305 IVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFKKNYAKAAKYWLK--AEE 362
Query: 212 MGTPD 226
MG PD
Sbjct: 363 MGNPD 367
>AB018289-1|BAA34466.1| 1029|Homo sapiens KIAA0746 protein protein.
Length = 1029
Score = 28.7 bits (61), Expect = 9.3
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 47 ITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVG-----FKKRAPRAIKEIRKFAEKQ 211
I + K +G +K + E++ + + LH+ ++G+G FKK +A K K ++
Sbjct: 632 IVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFKKNYAKAAKYWLK--AEE 689
Query: 212 MGTPD 226
MG PD
Sbjct: 690 MGNPD 694
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,857,718
Number of Sequences: 237096
Number of extensions: 1031270
Number of successful extensions: 6380
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6380
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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