Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30842.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.0  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   1.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   4.2  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   5.5  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   5.5  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   5.5  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   7.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.7  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 210 ILILGLDGAGKTTIL 254
           + ILG  GAGKTT+L
Sbjct: 107 LAILGSSGAGKTTLL 121


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 210 ILILGLDGAGKTTIL 254
           + ILG  GAGKTT+L
Sbjct: 107 LAILGSSGAGKTTLL 121


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 40  CAPCVNKYKETISKIFNVQTK 102
           CA C +K+KE I K+ +   K
Sbjct: 70  CAKCNDKHKEGIRKVIHYLVK 90


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 391 TSPIRPNTGLSPKIPHL 341
           T  I P+ GLSP  PHL
Sbjct: 227 TGLIPPHPGLSPHPPHL 243


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 391 TSPIRPNTGLSPKIPHL 341
           T  I P+ GLSP  PHL
Sbjct: 119 TGLIPPHPGLSPHPPHL 135


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 593 RPSPRALGVPSATVRHPAMSCLLAKTTST 507
           R +P  L  P+ T  HP+ SC  A +TS+
Sbjct: 80  RLAPTHLQSPN-TQTHPSASCKYADSTSS 107


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 40  CAPCVNKYKETISKIFN 90
           CA C  K+KE + K+ +
Sbjct: 72  CAKCNEKHKEGVRKVIH 88


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 40  CAPCVNKYKETISKIFN 90
           CA C  K+KE + K+ +
Sbjct: 72  CAKCNEKHKEGVRKVLH 88


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 40  CAPCVNKYKETISKIFN 90
           CA C  K+KE + K+ +
Sbjct: 72  CAKCNEKHKEGVRKVIH 88


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 40  CAPCVNKYKETISKI 84
           CA C  K+KE + K+
Sbjct: 71  CAKCNEKHKEGVRKV 85


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -3

Query: 318 TCSTLNPIVGIVVTTSPTCNL*ELSSFRHRPIQVSKSAFP 199
           T ST + +       SPT N   L+S    P Q+S    P
Sbjct: 303 TYSTWSTVQTPTTVMSPTINCWSLTSSPPPPYQISAQPTP 342


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 589 QAPGPWVYPRLLSDIRP 539
           +AP PW+Y   +  + P
Sbjct: 213 RAPRPWIYNETIYSLTP 229


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +2

Query: 221 WIGRCRKDDNSYKLQVGEVVTTIPTI 298
           W   C+K  +S K    +++  +PT+
Sbjct: 762 WQSNCKKGASSDKPNFTKLIQVVPTM 787


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -2

Query: 289 YSGHDLTDLQFIRIVVFPAPSNPSI 215
           +SGH L     + + ++    NP+I
Sbjct: 392 HSGHKLAKASIVNLHIYDLHHNPAI 416


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 508 VLVVLANKQDMAGCLTVAEGTPRALGLGRPCA 603
           VL+V +  Q  + C T + G P   G    CA
Sbjct: 25  VLLVKSEPQLHSPCATGSNGLPAGAGSNLLCA 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,732
Number of Sequences: 336
Number of extensions: 3787
Number of successful extensions: 25
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)