Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30842.Seq
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       41   4e-05
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      36   0.002
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            31   0.035
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       29   0.19 
AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha su...    27   0.75 
AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha su...    27   0.75 
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.3  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   2.3  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    25   2.3  
AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione S-tran...    25   3.0  
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        23   7.0  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   9.2  

>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 40.7 bits (91), Expect = 4e-05
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = +2

Query: 281 TTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYW-RCYYGNTDAIIYVVDSADRDRIGI 457
           T + T G      ++K++ F+++D+GGQ S R  W  C+ G T AII+ V  +  D +  
Sbjct: 176 TRVKTTGIVETHFSFKSIHFKMFDVGGQRSERKKWIHCFEGVT-AIIFCVALSGYDLVLA 234

Query: 458 SKDELVHMLREEEL 499
             +E+  M+   +L
Sbjct: 235 EDEEMNRMIESMKL 248



 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 183 GLLGAREMRILILGLDGAGKTTILINCKSV 272
           G   A E+++L+LG   +GK+TI+   K +
Sbjct: 26  GERAASEVKLLLLGAGESGKSTIVKQMKII 55


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 17/55 (30%), Positives = 31/55 (56%)
 Frame = +2

Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRI 451
           +PT G        + ++F++ D+GGQ S R  W   + N  +II++V  ++ D+I
Sbjct: 178 VPTTGIIEYPFDLEEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQI 232



 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +3

Query: 198 REMRILILGLDGAGKTTIL 254
           RE+++L+LG   +GK+T +
Sbjct: 32  RELKLLLLGTGESGKSTFI 50


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 31.1 bits (67), Expect = 0.035
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +2

Query: 332 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE 490
           +KF++WD  GQ         YY    A I V D  + D    +K  +  + R+
Sbjct: 73  VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQ 125


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 0.19
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +2

Query: 332 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE 490
           + F ++D+GGQ   R  W   + +  AII+V   +  + + + +D   + LRE
Sbjct: 206 VNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMV-LREDPTQNRLRE 257


>AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha
           subunit AgOn protein.
          Length = 134

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +3

Query: 183 GLLGAREMRILILGLDGAGKTTILINCKSV 272
           G+  A+++++L+LG   +GK+TI+   K +
Sbjct: 14  GIQAAKDIKLLLLGAGESGKSTIVKQMKII 43


>AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha
           subunit AgOa protein.
          Length = 134

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +3

Query: 183 GLLGAREMRILILGLDGAGKTTILINCKSV 272
           G+  A+++++L+LG   +GK+TI+   K +
Sbjct: 14  GIQAAKDIKLLLLGAGESGKSTIVKQMKII 43


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 210 ILILGLDGAGKTTILINCKSVRS*P 284
           + ++G  GAGKTT L+N  + RS P
Sbjct: 129 LAVMGSSGAGKTT-LLNALAFRSPP 152


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 210 ILILGLDGAGKTTILINCKSVRS*P 284
           + ++G  GAGKTT L+N  + RS P
Sbjct: 129 LAVMGSSGAGKTT-LLNALAFRSPP 152


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 210 ILILGLDGAGKTTILINCKSVRS*P 284
           + ++G  GAGKTT L+N  + RS P
Sbjct: 107 LAVMGSSGAGKTT-LLNALAFRSPP 130


>AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 229

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +2

Query: 182 RIAG---CKGNADFDTWIGRCRKDDNSYKLQVGEVV 280
           R+AG   C+G  +   W+ R R+  N Y  Q  ++V
Sbjct: 181 RMAGYDPCEGRPNLTQWMARVRESTNPYYDQAHKLV 216


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 69  FFVLIYTWSTLNILFNNKY 13
           F  LIY + T ++LFN  Y
Sbjct: 425 FVFLIYDYGTRSVLFNGVY 443


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
 Frame = -2

Query: 430 VYNIYYCICVAI--VTSPIRP--NTGLSPKIPHLE 338
           ++ I +C C+        I P   TG+SP  PH E
Sbjct: 408 IHRIQHCTCMLQNNARESISPASGTGMSPSYPHSE 442


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,212
Number of Sequences: 2352
Number of extensions: 14705
Number of successful extensions: 35
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)