Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30842.Seq
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identi... 141 5e-34
At5g14670.1 68418.m01719 ADP-ribosylation factor, putative simil... 122 2e-28
At3g62290.1 68416.m06998 ADP-ribosylation factor identical to GP... 122 2e-28
At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identi... 122 2e-28
At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearl... 122 2e-28
At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearl... 122 2e-28
At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearl... 122 2e-28
At1g23490.1 68414.m02948 ADP-ribosylation factor identical to SP... 122 2e-28
At1g10630.1 68414.m01205 ADP-ribosylation factor, putative simil... 122 2e-28
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 117 9e-27
At3g03120.1 68416.m00308 ADP-ribosylation factor, putative simil... 117 9e-27
At3g22950.1 68416.m02893 ADP-ribosylation factor, putative simil... 111 6e-25
At2g15310.1 68415.m01746 ADP-ribosylation factor, putative simil... 105 4e-23
At2g18390.1 68415.m02142 ADP-ribosylation factor-like protein 2 ... 83 2e-16
At5g37680.1 68418.m04538 ADP-ribosylation factor, putative ADP-r... 77 1e-14
At3g49870.1 68416.m05452 ADP-ribosylation factor, putative simil... 75 6e-14
At5g67560.1 68418.m08519 ADP-ribosylation factor, putative ident... 74 1e-13
At3g49860.1 68416.m05451 ADP-ribosylation factor, putative simil... 70 1e-12
At5g52210.2 68418.m06481 ADP-ribosylation factor, putative simil... 68 7e-12
At5g52210.1 68418.m06480 ADP-ribosylation factor, putative simil... 68 7e-12
At3g62560.1 68416.m07028 GTP-binding protein, putative similar t... 64 9e-11
At1g02440.1 68414.m00192 ADP-ribosylation factor, putative simil... 63 2e-10
At4g02080.1 68417.m00279 GTP-binding protein (SAR1A) identical t... 62 3e-10
At1g56330.1 68414.m06475 GTP-binding protein (SAR1B) identical t... 61 8e-10
At1g02430.1 68414.m00190 ADP-ribosylation factor, putative simil... 61 8e-10
At1g09180.1 68414.m01025 GTP-binding protein, putative strong si... 59 2e-09
At5g03530.1 68418.m00309 Ras-related GTP-binding family protein ... 39 0.003
At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putati... 39 0.004
At2g42550.1 68415.m05266 protein kinase family protein contains ... 37 0.011
At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small GTP... 37 0.011
At1g02620.1 68414.m00212 GTP-binding protein (SAR1A) identical t... 36 0.020
At4g17170.1 68417.m02583 Rab2-like GTP-binding protein (RAB2) id... 36 0.026
At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putati... 36 0.034
At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putati... 35 0.060
At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putati... 35 0.060
At5g59840.1 68418.m07503 Ras-related GTP-binding family protein ... 34 0.079
At4g35860.1 68417.m05093 Ras-related GTP-binding protein, putati... 34 0.079
At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putati... 34 0.079
At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putati... 34 0.079
At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small GTP... 34 0.079
At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putati... 34 0.10
At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putati... 33 0.14
At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putati... 33 0.14
At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small GT... 32 0.32
At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putati... 32 0.42
At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putati... 31 0.97
At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putati... 31 0.97
At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putati... 30 1.3
At5g65270.1 68418.m08210 Ras-related GTP-binding family protein ... 30 1.7
At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small GTP... 30 1.7
At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / sma... 30 1.7
At5g60690.1 68418.m07616 homeodomain-leucine zipper protein Revo... 29 2.2
At5g47960.1 68418.m05925 Ras-related GTP-binding family protein ... 29 2.2
At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putati... 29 2.2
At1g18200.1 68414.m02264 Ras-related GTP-binding family protein ... 29 3.0
At3g12160.1 68416.m01516 Ras-related GTP-binding family protein ... 29 3.9
At3g07410.1 68416.m00883 Ras-related GTP-binding family protein ... 29 3.9
At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putati... 29 3.9
At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identic... 28 5.2
At4g16420.2 68417.m02485 transcriptional adaptor (ADA2b) identic... 28 5.2
At4g16420.1 68417.m02484 transcriptional adaptor (ADA2b) identic... 28 5.2
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 28 5.2
At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putati... 28 5.2
At4g18800.1 68417.m02776 Ras-related GTP-binding family protein ... 28 6.8
At5g46170.1 68418.m05679 F-box family protein contains F-box dom... 27 9.0
At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small GTP-... 27 9.0
At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putati... 27 9.0
At1g73640.1 68414.m08525 Ras-related GTP-binding family protein ... 27 9.0
At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putati... 27 9.0
>At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identical
to GP:453191 ADP-ribosylation factor 3 {Arabidopsis
thaliana}; contains domain PF00025: ADP-ribosylation
factor family
Length = 182
Score = 141 bits (341), Expect = 5e-34
Identities = 62/88 (70%), Positives = 74/88 (84%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
Y+LQ+GEVV+TIPTIGFNVE V Y N+KFQVWDLGGQTSIRPYWRCY+ NT A+IYVVDS
Sbjct: 35 YRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAYSL 517
+D DRIG++K+E +L E+EL A L
Sbjct: 95 SDTDRIGVAKEEFHAILEEDELKGAVVL 122
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +3
Query: 156 MGGLFS-YFRGLLGAREMRILILGLDGAGKTTIL 254
MG LF+ F + G +E RIL+LGLD AGKTTIL
Sbjct: 1 MGILFTRMFSSVFGNKEARILVLGLDNAGKTTIL 34
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +1
Query: 508 VLVVLANKQDMAGCLTVAEGTPRALGLGRPCAIRTFQIFKTSAV 639
V+++ ANKQD+ G L A T AL L + R + IFKT AV
Sbjct: 120 VVLIFANKQDLPGALDDAAVT-EALELHK-IKSRQWAIFKTCAV 161
>At5g14670.1 68418.m01719 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor DcARF1 (GI:965483) [Daucus
carota].
Length = 188
Score = 122 bits (294), Expect = 2e-28
Identities = 55/88 (62%), Positives = 68/88 (77%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAYSL 517
DRDR+ ++DEL ML E+EL +A L
Sbjct: 95 NDRDRVVEARDELHRMLNEDELRDAVLL 122
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3
Query: 177 FRGLLGAREMRILILGLDGAGKTTILINCK 266
F L +EMRIL++GLD AGKTTIL K
Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLK 38
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 496 ISERVLVVLANKQDMAGCLTVAEGTPRALGL 588
+ + VL+V ANKQD+ + AE T + LGL
Sbjct: 116 LRDAVLLVFANKQDLPNAMNAAEITDK-LGL 145
>At3g62290.1 68416.m06998 ADP-ribosylation factor identical to
GP:166586 ADP-ribosylation factor {Arabidopsis
thaliana}; ADP-ribosylation factor 1 - Arabidopsis
thaliana, PIR:S28875
Length = 181
Score = 122 bits (294), Expect = 2e-28
Identities = 55/88 (62%), Positives = 68/88 (77%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAYSL 517
DRDR+ ++DEL ML E+EL +A L
Sbjct: 95 NDRDRVVEARDELHRMLNEDELRDAVLL 122
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3
Query: 177 FRGLLGAREMRILILGLDGAGKTTILINCK 266
F L +EMRIL++GLD AGKTTIL K
Sbjct: 9 FSKLFAKKEMRILMVGLDAAGKTTILYKLK 38
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 496 ISERVLVVLANKQDMAGCLTVAEGTPRALGL 588
+ + VL+V ANKQD+ + AE T + LGL
Sbjct: 116 LRDAVLLVFANKQDLPNAMNAAEITDK-LGL 145
>At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identical
to ADP-ribosylation factor ARF1({Arabidopsis thaliana}
(SP:P36397) (GP:166586)
Length = 181
Score = 122 bits (294), Expect = 2e-28
Identities = 55/88 (62%), Positives = 68/88 (77%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAYSL 517
DRDR+ ++DEL ML E+EL +A L
Sbjct: 95 NDRDRVVEARDELHRMLNEDELRDAVLL 122
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3
Query: 177 FRGLLGAREMRILILGLDGAGKTTILINCK 266
F L +EMRIL++GLD AGKTTIL K
Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLK 38
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 496 ISERVLVVLANKQDMAGCLTVAEGTPRALGL 588
+ + VL+V ANKQD+ + AE T + LGL
Sbjct: 116 LRDAVLLVFANKQDLPNAMNAAEITDK-LGL 145
>At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 122 bits (294), Expect = 2e-28
Identities = 55/88 (62%), Positives = 68/88 (77%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAYSL 517
DRDR+ ++DEL ML E+EL +A L
Sbjct: 95 NDRDRVVEARDELHRMLNEDELRDAVLL 122
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3
Query: 177 FRGLLGAREMRILILGLDGAGKTTILINCK 266
F L +EMRIL++GLD AGKTTIL K
Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLK 38
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 496 ISERVLVVLANKQDMAGCLTVAEGTPRALGL 588
+ + VL+V ANKQD+ + AE T + LGL
Sbjct: 116 LRDAVLLVFANKQDLPNAMNAAEITDK-LGL 145
>At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 122 bits (294), Expect = 2e-28
Identities = 55/88 (62%), Positives = 68/88 (77%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAYSL 517
DRDR+ ++DEL ML E+EL +A L
Sbjct: 95 NDRDRVVEARDELHRMLNEDELRDAVLL 122
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3
Query: 177 FRGLLGAREMRILILGLDGAGKTTILINCK 266
F L +EMRIL++GLD AGKTTIL K
Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLK 38
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 496 ISERVLVVLANKQDMAGCLTVAEGTPRALGL 588
+ + VL+V ANKQD+ + AE T + LGL
Sbjct: 116 LRDAVLLVFANKQDLPNAMNAAEITDK-LGL 145
>At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 122 bits (294), Expect = 2e-28
Identities = 55/88 (62%), Positives = 68/88 (77%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAYSL 517
DRDR+ ++DEL ML E+EL +A L
Sbjct: 95 NDRDRVVEARDELHRMLNEDELRDAVLL 122
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3
Query: 177 FRGLLGAREMRILILGLDGAGKTTILINCK 266
F L +EMRIL++GLD AGKTTIL K
Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLK 38
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 496 ISERVLVVLANKQDMAGCLTVAEGTPRALGL 588
+ + VL+V ANKQD+ + AE T + LGL
Sbjct: 116 LRDAVLLVFANKQDLPNAMNAAEITDK-LGL 145
>At1g23490.1 68414.m02948 ADP-ribosylation factor identical to
SP:Q9SRC3 ADP-ribosylation factor 1-like [Arabidopsis
thaliana], ADP-ribosylation factor GI:166586
[Arabidopsis thaliana]
Length = 181
Score = 122 bits (294), Expect = 2e-28
Identities = 55/88 (62%), Positives = 68/88 (77%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAYSL 517
DRDR+ ++DEL ML E+EL +A L
Sbjct: 95 NDRDRVVEARDELHRMLNEDELRDAVLL 122
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3
Query: 177 FRGLLGAREMRILILGLDGAGKTTILINCK 266
F L +EMRIL++GLD AGKTTIL K
Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLK 38
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 496 ISERVLVVLANKQDMAGCLTVAEGTPRALGL 588
+ + VL+V ANKQD+ + AE T + LGL
Sbjct: 116 LRDAVLLVFANKQDLPNAMNAAEITDK-LGL 145
>At1g10630.1 68414.m01205 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GI:166586 from [Arabidopsis
thaliana]
Length = 181
Score = 122 bits (294), Expect = 2e-28
Identities = 55/88 (62%), Positives = 68/88 (77%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++GE+VTTIPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ NT +I+VVDS
Sbjct: 35 YKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAYSL 517
DRDR+ ++DEL ML E+EL +A L
Sbjct: 95 NDRDRVVEARDELHRMLNEDELRDAVLL 122
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3
Query: 177 FRGLLGAREMRILILGLDGAGKTTILINCK 266
F L +EMRIL++GLD AGKTTIL K
Sbjct: 9 FSRLFAKKEMRILMVGLDAAGKTTILYKLK 38
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 496 ISERVLVVLANKQDMAGCLTVAEGTPRALGL 588
+ + VL+V ANKQD+ + AE T + LGL
Sbjct: 116 LRDAVLLVFANKQDLPNAMNAAEITDK-LGL 145
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 117 bits (281), Expect = 9e-27
Identities = 49/88 (55%), Positives = 67/88 (76%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL +GEV++T+PTIGFNVE+V YKN+ F VWD+GGQ +RP WR Y+ NTD +IYVVDS
Sbjct: 35 YKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAYSL 517
DR+RIG +K E ++++ + N+ L
Sbjct: 95 LDRERIGKAKQEFQEIIKDPFMLNSIIL 122
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 156 MGGLF-SYFRGLLGAREMRILILGLDGAGKTTIL 254
MG F F G +EMR+++LGLD AGKTTIL
Sbjct: 1 MGQAFRKLFDTFFGNQEMRVVMLGLDAAGKTTIL 34
>At3g03120.1 68416.m00308 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster}
Length = 192
Score = 117 bits (281), Expect = 9e-27
Identities = 50/88 (56%), Positives = 67/88 (76%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL +GEV++T+PTIGFNVE+V YKN+ F VWD+GGQ +RP WR Y+ NTD +IYVVDS
Sbjct: 35 YKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANAYSL 517
DR+RIG +K E ++R+ + N+ L
Sbjct: 95 LDRERIGKAKQEFQDIIRDPFMLNSVIL 122
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 156 MGGLF-SYFRGLLGAREMRILILGLDGAGKTTIL 254
MG F F G +EMR+++LGLD AGKTTIL
Sbjct: 1 MGQTFRKLFDTFFGNQEMRVVMLGLDAAGKTTIL 34
>At3g22950.1 68416.m02893 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:P91924 [Dugesia japonica]
Length = 183
Score = 111 bits (266), Expect = 6e-25
Identities = 50/93 (53%), Positives = 63/93 (67%)
Frame = +2
Query: 239 KDDNSYKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAII 418
K YKL +GEVVTT PT+G NVE++ YKN++F+VWDLGGQ +R W YY T A+I
Sbjct: 30 KTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLRTSWATYYRGTHAVI 89
Query: 419 YVVDSADRDRIGISKDELVHMLREEELANAYSL 517
V+DS DR RI KDEL +L E+L N+ L
Sbjct: 90 VVIDSTDRARISFMKDELARLLGHEDLQNSVIL 122
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 156 MGGLFSYFRGLL-GAREMRILILGLDGAGKTTIL 254
MG S F ++ A+E +I+++GLD AGKTT L
Sbjct: 1 MGAFMSRFWFMMFPAKEYKIVVVGLDNAGKTTTL 34
>At2g15310.1 68415.m01746 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor (GI:861205) [Chlamydomonas
reinhardtii]
Length = 205
Score = 105 bits (251), Expect = 4e-23
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = +2
Query: 254 YKLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDS 433
YKL++GEVVTT+PTIGFN+E V YK + F VWD+GGQ IR WR Y+ N +I+VVDS
Sbjct: 35 YKLKLGEVVTTVPTIGFNLETVEYKGINFTVWDIGGQEKIRKLWRHYFQNAQGLIFVVDS 94
Query: 434 ADRDRIGISKDELVHMLREEELANA 508
+D +R+ +++EL +L + EL A
Sbjct: 95 SDSERLSEARNELHRILTDNELEGA 119
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 156 MGGLFSYF-RGLLGAREMRILILGLDGAGKTTILINCK 266
MG FS + L ++RIL++GLDG+GKTTIL K
Sbjct: 1 MGARFSRIAKRFLPKSKVRILMVGLDGSGKTTILYKLK 38
>At2g18390.1 68415.m02142 ADP-ribosylation factor-like protein 2
(ARL2) identical to ARL2 G-protein (Halimasch; HAL;
TITAN5) GI:20514265 from [Arabidopsis thaliana];
identical to cDNA ARL2 G-protein mRNA GI:20514264;
contains Pfam profile PF00025: ADP-ribosylation factor
family; contains TIGRfam profile TIGR00231: small
GTP-binding protein domain
Length = 185
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/81 (44%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Frame = +2
Query: 269 GEVVTTI-PTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 445
GE + I PT+GFN++ + Y+ +WD+GGQ +IR YWR Y+ TD +++VVDS+D
Sbjct: 38 GEDTSVISPTLGFNIKTIIYQKYTLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLR 97
Query: 446 RIGISKDELVHMLREEELANA 508
R+ K EL ++L+EE LA +
Sbjct: 98 RLDDCKMELDNLLKEERLAGS 118
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +3
Query: 162 GLFSYFRGLLGA-REMRILILGLDGAGKTTILI 257
GL S R + +EMRIL++GLD +GKTTI++
Sbjct: 2 GLLSIIRKIKKKEKEMRILMVGLDNSGKTTIVL 34
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 481 VKGRRISERVLVVLANKQDMAGCLTVAE 564
+K R++ L++LANKQD+ G LT E
Sbjct: 110 LKEERLAGSSLLILANKQDIQGALTPDE 137
>At5g37680.1 68418.m04538 ADP-ribosylation factor, putative
ADP-ribosylation factor, Leishmania major, EMBL:LMFP1421
and ADP-ribosylation factor-like protein 1 (ARL1)
(SP:P40616) Homo sapiens; contains PF00025:
ADP-ribosylation factor family
Length = 184
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
IPT+GFN+ +VT N+ ++WDLGGQ R W Y AI+YV+D+ADRD + IS+
Sbjct: 49 IPTVGFNMRKVTKGNVTIKIWDLGGQRRFRTMWERYCRGVSAIVYVIDAADRDSVPISRS 108
Query: 467 ELVHMLREEEL 499
EL +L + L
Sbjct: 109 ELNDLLTKPSL 119
>At3g49870.1 68416.m05452 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor-like protein 1 (SP:P40616)
[Homo sapiens]; ARF3 ADP-RIBOSYLATION FACTOR,GP:453191
Arabidopsis thaliana; contains domain PF00025:
ADP-ribosylation factor family
Length = 184
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
IPT+GFN+ +VT N+ ++WDLGGQ R W Y AI+YVVD+AD D + +SK
Sbjct: 49 IPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSVSKS 108
Query: 467 ELVHMLREEEL 499
EL +L + L
Sbjct: 109 ELHDLLSKTSL 119
>At5g67560.1 68418.m08519 ADP-ribosylation factor, putative
identical to GP:15450888 ADP-ribosylation factor-like
protein {Arabidopsis thaliana]
Length = 184
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
IPT+GFN+ +VT ++ ++WDLGGQ R W Y + AI+YVVD+AD D + +SK
Sbjct: 49 IPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRSVSAIVYVVDAADPDNLSVSKS 108
Query: 467 ELVHMLREEEL 499
EL +L + L
Sbjct: 109 ELHDLLSKTSL 119
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 165 LFSYFRGLLGAREMRILILGLDGAGKTTIL 254
L ++ R L +EM + ++GL AGKT+++
Sbjct: 7 LLNWLRSLFFKQEMELSLIGLQNAGKTSLV 36
>At3g49860.1 68416.m05451 ADP-ribosylation factor, putative similar
to GTP-binding ADP-ribosylation factor homolog 1 protein
(SP:P25160) [Drosophila melanogaster] and various
ADP-RIBOSYLATION FACTOR (ARF) - like proteins; contains
PF00025: ADP-ribosylation factor family domain
Length = 165
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
IPT+GFN+ +VT +N+ ++WDLGGQ R W Y I+YVVD+AD + + +S+
Sbjct: 30 IPTVGFNMRKVTKENVAIRLWDLGGQPRFRCMWERYCRAVSMIVYVVDAADTENLSVSRS 89
Query: 467 ELVHMLREEEL 499
EL +L L
Sbjct: 90 ELHDLLSNASL 100
>At5g52210.2 68418.m06481 ADP-ribosylation factor, putative similar
to arf-related protein (ARP) (SP:Q63055){Rattus
norvegicus}; contains Pfam domain PF00025:
ADP-ribosylation factor family
Length = 205
Score = 67.7 bits (158), Expect = 7e-12
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+PT+G N+ ++ N K WDLGGQ +R W YY A+IY++D+A R SK
Sbjct: 53 VPTVGLNIGRIEVSNAKIVFWDLGGQPGLRSIWEKYYEEAHALIYLIDAACPTRFEDSKS 112
Query: 467 ELVHMLREEELANA 508
L LR E+L A
Sbjct: 113 ALEKALRHEDLQGA 126
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 144 LINKMGGLFSYFRGLLGAREMRILILGLDGAGKTTILINCKSVRS 278
+ + M GL+SY + E +LILG+D AGKTT L K++ S
Sbjct: 1 MFSLMSGLWSY---MFSKTEFNVLILGIDKAGKTTFLEKLKTIYS 42
>At5g52210.1 68418.m06480 ADP-ribosylation factor, putative similar
to arf-related protein (ARP) (SP:Q63055){Rattus
norvegicus}; contains Pfam domain PF00025:
ADP-ribosylation factor family
Length = 205
Score = 67.7 bits (158), Expect = 7e-12
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +2
Query: 287 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKD 466
+PT+G N+ ++ N K WDLGGQ +R W YY A+IY++D+A R SK
Sbjct: 53 VPTVGLNIGRIEVSNAKIVFWDLGGQPGLRSIWEKYYEEAHALIYLIDAACPTRFEDSKS 112
Query: 467 ELVHMLREEELANA 508
L LR E+L A
Sbjct: 113 ALEKALRHEDLQGA 126
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 144 LINKMGGLFSYFRGLLGAREMRILILGLDGAGKTTILINCKSVRS 278
+ + M GL+SY + E +LILG+D AGKTT L K++ S
Sbjct: 1 MFSLMSGLWSY---MFSKTEFNVLILGIDKAGKTTFLEKLKTIYS 42
>At3g62560.1 68416.m07028 GTP-binding protein, putative similar to
GTP-binding protein SAR1A (SP:O04834) [Arabidopsis
thaliana]; small GTP-binding protein Bsar1a - Brassica
campestris, EMBL:U55035
Length = 193
Score = 64.1 bits (149), Expect = 9e-11
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +2
Query: 290 PTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDE 469
PT E+++ +KF+ +DLGG R W+ YY DA++Y+VD+ D++R SK E
Sbjct: 50 PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKE 109
Query: 470 LVHMLREEELAN 505
L +L +E LAN
Sbjct: 110 LDALLSDESLAN 121
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 189 LGAREMRILILGLDGAGKTTILINCKSVR 275
L +E +IL LGLD AGKTT+L K R
Sbjct: 16 LWQKEAKILFLGLDNAGKTTLLHMLKDER 44
>At1g02440.1 68414.m00192 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:AAA32729 GI:166586 from
(Arabidopsis thaliana)
Length = 190
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +2
Query: 224 IGRCRKDDNSYKLQVGEVVTT-IPTIGFNVEQVTYKNLKFQVWDLGGQTSIR--PYWRCY 394
+G K +K + GE +TT +PT+G NVE V YK+ W++GGQ P W+ +
Sbjct: 25 LGGTGKSSIMHKFKTGETLTTTMPTVGLNVESVKYKDSNLCFWEMGGQQCYMWFPLWKHW 84
Query: 395 YGNTDAIIYVVDSADRDRIGISKDEL 472
+ ++ VVDS RD+I +KD L
Sbjct: 85 FQEIAGLVLVVDSTGRDQIEETKDFL 110
>At4g02080.1 68417.m00279 GTP-binding protein (SAR1A) identical to
SP:O04834 GTP-binding protein SAR1A. [Arabidopsis
thaliana]
Length = 193
Score = 62.1 bits (144), Expect = 3e-10
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = +2
Query: 290 PTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDE 469
PT E+++ +KF+ +DLGG R W+ YY DA++Y+VD+ D++R SK E
Sbjct: 50 PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKE 109
Query: 470 LVHMLREEELAN 505
L +L +E LA+
Sbjct: 110 LDALLSDESLAS 121
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 189 LGAREMRILILGLDGAGKTTILINCKSVR 275
L +E +IL LGLD AGKTT+L K R
Sbjct: 16 LWQKEAKILFLGLDNAGKTTLLHMLKDER 44
>At1g56330.1 68414.m06475 GTP-binding protein (SAR1B) identical to
GTP-binding protein (SAR1B) [Arabidopsis thaliana]
SP:Q01474
Length = 193
Score = 60.9 bits (141), Expect = 8e-10
Identities = 28/71 (39%), Positives = 43/71 (60%)
Frame = +2
Query: 290 PTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDE 469
PT E+++ +KF+ +DLGG R W+ YY DA++Y+VD+ D++R SK E
Sbjct: 50 PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRE 109
Query: 470 LVHMLREEELA 502
L +L +E LA
Sbjct: 110 LDALLSDEALA 120
Score = 35.9 bits (79), Expect = 0.026
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Frame = +3
Query: 165 LFSYFRGLLGA-----REMRILILGLDGAGKTTILINCKSVR 275
LF +F G+L + +E +IL LGLD AGKTT+L K R
Sbjct: 3 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDER 44
>At1g02430.1 68414.m00190 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GI:166586 from [Arabidopsis
thaliana]
Length = 157
Score = 60.9 bits (141), Expect = 8e-10
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = +2
Query: 254 YKLQVGEVVTT-IPTIGFNVEQVTYKNLKFQVWDLGGQTSIR--PYWRCYYGNTDAIIYV 424
+KL+ GE +TT +PTIG +VE V YK+ + W++GGQ + P + + ++ V
Sbjct: 2 HKLKTGETLTTTMPTIGTDVESVKYKDSNLRFWEMGGQQCYKWFPMTKHDFQEIAGLVLV 61
Query: 425 VDSADRDRIGISKDELVHMLRE 490
VDS DRDRI +KD L ++ E
Sbjct: 62 VDSTDRDRIEDAKDFLNAVIDE 83
>At1g09180.1 68414.m01025 GTP-binding protein, putative strong
similarity to SP:Q01474 GTP-binding protein SAR1B and
SP:O04834 GTP-binding protein SAR1A [Arabidopsis
thaliana]
Length = 193
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 290 PTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDE 469
PT E+++ + F+ +DLGG R W+ Y DA++Y+VD+ DRDR SK E
Sbjct: 50 PTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRE 109
Query: 470 LVHMLREEELAN 505
L +L +E LAN
Sbjct: 110 LDALLSDEALAN 121
Score = 35.9 bits (79), Expect = 0.026
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Frame = +3
Query: 165 LFSYFRGLLGA-----REMRILILGLDGAGKTTILINCKSVR 275
LF +F G+L + +E +IL LGLD AGKTT+L K R
Sbjct: 3 LFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDER 44
>At5g03530.1 68418.m00309 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 210
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +2
Query: 290 PTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 445
PTIG F ++Q+T K LK +WD GQ R YY II V D R+
Sbjct: 43 PTIGVDFKIKQLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRE 98
>At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putative
similar to GTP-binding protein(RAB1Y) GI:1370173 from
(Lotus japonicus)
Length = 212
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 290 PTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 445
PTIG F V+ +T K LK +WD GQ R YY II V D RD
Sbjct: 43 PTIGVDFKVKYLTIGEKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRD 98
>At2g42550.1 68415.m05266 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 344
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = -2
Query: 367 GLSPKIPH---LELEIFICDLFYVEPNRRYSGHDLTDLQFIRIVVFPAPSNPSIKIRISL 197
G +P+IP + F+ F P R S DL QF+R V S P +K++I L
Sbjct: 234 GKAPEIPKSLPCDARKFLETCFSRNPKERGSASDLLSHQFLRGEVVSGFSLPPLKLKIKL 293
Query: 196 APSNPLK*LNRP 161
AP P +P
Sbjct: 294 APEKPTNVSKKP 305
>At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small
GTP-binding protein, putative identical to Ras-related
protein ARA-5 SP:P28188 from [Arabidopsis thaliana]
Length = 203
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 236 RKDDNSYKLQVGEVVTTIPTIGFNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTD 409
R D+SY V ++TI + F + V K +K Q+WD GQ R YY
Sbjct: 27 RFSDDSY---VESYISTIG-VDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAH 82
Query: 410 AIIYVVDSADRD 445
II V D D +
Sbjct: 83 GIIIVYDVTDEE 94
>At1g02620.1 68414.m00212 GTP-binding protein (SAR1A) identical to
GTP-binding protein Sar1 (SP:O04834) [Arabidopsis
thaliana]; contains domain PF00025: ADP-ribosylation
factor family
Length = 122
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 392 YYGNTDAIIYVVDSADRDRIGISKDELVHMLREEELA 502
++ DA++Y+VD+ D++R SK EL +L +E LA
Sbjct: 13 WFSQVDALVYLVDAYDQERFAESKKELDALLSDESLA 49
>At4g17170.1 68417.m02583 Rab2-like GTP-binding protein (RAB2)
identical to Rab2-like protein (At-RAB2) GI:1765896 from
[Arabidopsis thaliana]
Length = 211
Score = 35.9 bits (79), Expect = 0.026
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +2
Query: 293 TIG--FNVEQVTYKN--LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 445
TIG F +T N +K Q+WD GQ S R R YY + V D R+
Sbjct: 38 TIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE 92
>At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1208537 from [Glycine
max]
Length = 205
Score = 35.5 bits (78), Expect = 0.034
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +2
Query: 293 TIG--FNVEQVTYKN--LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 445
TIG F + +T N +K Q+WD GQ S R R YY + V D R+
Sbjct: 38 TIGVEFGAKTITIDNKPIKLQIWDTAGQESFRSVTRSYYRGRAGTLLVYDITRRE 92
>At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871508 from [Pisum
sativum]
Length = 216
Score = 34.7 bits (76), Expect = 0.060
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 278 VTTIPTIGFNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSAD 439
+TTI I F + V K +K Q+WD GQ R YY I+ V D D
Sbjct: 45 ITTIG-IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
>At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871510 from [Pisum
sativum]; contains Pfam profile: PF00071 Ras family
Length = 218
Score = 34.7 bits (76), Expect = 0.060
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 278 VTTIPTIGFNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSAD 439
+TTI I F + V K +K Q+WD GQ R YY I+ V D D
Sbjct: 45 ITTIG-IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
>At5g59840.1 68418.m07503 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 34.3 bits (75), Expect = 0.079
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 278 VTTIPTIGFNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSAD 439
+TTI I F + + K +K Q+WD GQ R YY I+ V D D
Sbjct: 45 ITTIG-IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
>At4g35860.1 68417.m05093 Ras-related GTP-binding protein, putative
similar to Rab2-like GTP-binding protein GI:1765896 from
[Arabidopsis thaliana]
Length = 211
Score = 34.3 bits (75), Expect = 0.079
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +2
Query: 293 TIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 445
TIG F VT + +K Q+WD GQ S R R YY + V D R+
Sbjct: 38 TIGVEFGARMVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE 92
>At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 34.3 bits (75), Expect = 0.079
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 278 VTTIPTIGFNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSAD 439
+TTI I F + + K +K Q+WD GQ R YY I+ V D D
Sbjct: 45 ITTIG-IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
>At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 34.3 bits (75), Expect = 0.079
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 278 VTTIPTIGFNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSAD 439
+TTI I F + + K +K Q+WD GQ R YY I+ V D D
Sbjct: 45 ITTIG-IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
>At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small
GTP-binding protein, putative identical to SP|P28186
Ras-related protein ARA-3 {Arabidopsis thaliana};
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 34.3 bits (75), Expect = 0.079
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 278 VTTIPTIGFNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSAD 439
+TTI I F + + K +K Q+WD GQ R YY I+ V D D
Sbjct: 45 ITTIG-IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTD 99
>At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putative
similar to Rab1-like small GTP-binding protein
GI:4096662 from [Petunia x hybrida]
Length = 205
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +2
Query: 287 IPTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 445
I TIG F + + K +K Q+WD GQ R YY II V D + +
Sbjct: 38 ISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEME 94
>At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303750 from [Pisum
sativum]
Length = 202
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = +2
Query: 287 IPTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSAD 439
I TIG F + V K +K Q+WD GQ R YY II D D
Sbjct: 38 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTD 92
>At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putative
very strong similarity to RAB1C [Lotus corniculatus var.
japonicus] GI:1370166; contains Pfam profile PF00071:
Ras family
Length = 202
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = +2
Query: 287 IPTIG--FNVEQVTY--KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSAD 439
I TIG F + V K +K Q+WD GQ R YY II D D
Sbjct: 38 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVTYDVTD 92
>At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small
GTP-binding protein, putative identical to SP|Q96283
Ras-related protein Rab11A {Arabidopsis thaliana};
identical to cDNA Rab11 protein GI:2598228
Length = 217
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +2
Query: 314 QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE 490
QV K +K Q+WD GQ R YY + V D R D ++ LRE
Sbjct: 55 QVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTF----DNVLRWLRE 109
>At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab11C SP:Q40193 from
[Lotus japonicus]
Length = 217
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +2
Query: 314 QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRDRIGISKDELVHMLRE 490
QV K +K Q+WD GQ R YY + V D R D ++ LRE
Sbjct: 55 QVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTF----DNVLRWLRE 109
>At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303738 from [Pisum
sativum]
Length = 224
Score = 30.7 bits (66), Expect = 0.97
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 317 VTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADRD 445
+ K++K Q+WD GQ R YY + V D R+
Sbjct: 61 IEQKSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRE 103
>At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11C GI:1370146 from
[Lotus japonicus]
Length = 214
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +2
Query: 314 QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 442
QV K +K Q+WD GQ R YY + V D R
Sbjct: 55 QVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKR 97
>At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:289370 from [Brassica
napus]
Length = 219
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +2
Query: 314 QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR---DRIGISKDEL 472
++ K +K Q+WD GQ R YY + V D + R + +G DEL
Sbjct: 55 EIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDEL 110
>At5g65270.1 68418.m08210 Ras-related GTP-binding family protein
similar to GTP-binding protein RAB11A GI:1370142 from
[Lotus japonicus]; contains Pfam profile: PF00071 Ras
family
Length = 226
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 317 VTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 442
+ +K++K Q+WD GQ R YY + V D R
Sbjct: 61 IDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRR 102
>At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small
GTP-binding protein, putative identical to SP:P28187
Ras-related protein ARA-4 {Arabidopsis thaliana}
Length = 214
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +2
Query: 326 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD---SADRDRIGISKDEL 472
K +K Q+WD GQ R YY + V D S+ + +G DEL
Sbjct: 59 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDEL 110
>At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / small
GTP-binding protein, putative nearly identical to
SP:P19892 Ras-related protein ARA-1 [Arabidopsis
thaliana] (Gene 76:313-319(1989))
Length = 261
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = +2
Query: 314 QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR---DRIGISKDEL 472
++ K +K Q+WD GQ R YY + V D R + +G DEL
Sbjct: 98 EIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDEL 153
>At5g60690.1 68418.m07616 homeodomain-leucine zipper protein
Revoluta (REV) / fascicular fiberless 1 (IFL1) identical
to HD-zip transcription factor Revoluta (GI:9759333)
{Arabidopsis thaliana}; contains Pfam profiles PF01852:
START domain and PF00046: Homeobox domain
Length = 842
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 298 WVQRRTSHI*KSQVPSVGSWGTDQY*ALLAMLLWQHRCNNICCRLS*Q 441
W+ + SH S++ ++ S G+D + LLW H+ +CC L Q
Sbjct: 698 WISQSYSHHLGSELLTIDSLGSDDS---VLKLLWDHQDAILCCSLKPQ 742
>At5g47960.1 68418.m05925 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 223
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +2
Query: 314 QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 442
++ K +K Q+WD GQ R YY + V D R
Sbjct: 58 EIDRKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKR 100
>At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11J GI:1370160 from
[Lotus japonicus]
Length = 221
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 326 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 442
K +K Q+WD GQ R YY + V D + R
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRR 99
>At1g18200.1 68414.m02264 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 354
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = +2
Query: 290 PTIGFNVE----QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 442
PTIG + +V K +K Q+WD GQ R YY + + D R
Sbjct: 44 PTIGVDFAYRNVRVGDKTIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRR 98
>At3g12160.1 68416.m01516 Ras-related GTP-binding family protein
similar to ras-related GTP-binding protein RGP1
SP:P25766 from [Oryza sativa];contains Pfam profile:
PF00071 Ras family
Length = 222
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +2
Query: 326 KNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 442
K +K Q+WD GQ R YY + V D R
Sbjct: 62 KTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKR 100
>At3g07410.1 68416.m00883 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 217
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 314 QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
++ K +K Q+WD GQ R YY + V D
Sbjct: 55 EIEGKEVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYD 93
>At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 219
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 314 QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
QV K +K Q+WD GQ R YY + V D
Sbjct: 57 QVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYD 95
>At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 486
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 182 RIAGCKGNADFDTWIGRCRKDDNSYKLQVGE 274
++AGC+ A+ + ++GR RK +N + G+
Sbjct: 351 QVAGCRSTAEAERYLGRKRKRENEEGMNRGK 381
>At4g16420.2 68417.m02485 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 483
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 182 RIAGCKGNADFDTWIGRCRKDDNSYKLQVGE 274
++AGC+ A+ + ++GR RK +N + G+
Sbjct: 348 QVAGCRSTAEAERYLGRKRKRENEEGMNRGK 378
>At4g16420.1 68417.m02484 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 487
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 182 RIAGCKGNADFDTWIGRCRKDDNSYKLQVGE 274
++AGC+ A+ + ++GR RK +N + G+
Sbjct: 352 QVAGCRSTAEAERYLGRKRKRENEEGMNRGK 382
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 325 ICDLFYVEPNRRYSGHDLTDLQFIRIVVF 239
ICD V+P RY+G D DLQ RI V+
Sbjct: 24 ICDEHGVDPTGRYNG-DSADLQLERINVY 51
>At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1370146 from [Lotus
japonicus]
Length = 217
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 314 QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
QV + +K Q+WD GQ R YY + V D
Sbjct: 55 QVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYD 93
>At4g18800.1 68417.m02776 Ras-related GTP-binding family protein
similar to ras-related GTP binding protein RIC2
SP:P40393 from [Oryza sativa]; contains Pfam profile:
PF00071 Ras family
Length = 214
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 317 VTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
V K +K Q+WD GQ R YY + V D
Sbjct: 57 VNEKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYD 94
>At5g46170.1 68418.m05679 F-box family protein contains F-box domain
Pfam:PF00646
Length = 395
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 242 DDNSYKLQVGEVVTTIPT-IGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNT 406
DD+ +++ G V PT + N +++ Y ++ +LG + WR +G+T
Sbjct: 144 DDDGGEIEQGGVTHHSPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGST 199
>At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small
GTP-binding protein identical to Ras-related protein
RHA1 SP:P31582 from [Arabidopsis thaliana]
Length = 200
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 332 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
+KF++WD GQ YY A I V D
Sbjct: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFD 91
>At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB5A GI:1370178 from
[Lotus japonicus]
Length = 200
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 332 LKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVD 430
+KF++WD GQ YY A I V D
Sbjct: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFD 91
>At1g73640.1 68414.m08525 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 ras family Pfam profile:
PF00071 Ras family
Length = 233
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Frame = +2
Query: 290 PTIG----FNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 442
PTIG + V K +K Q+WD GQ R YY + + D R
Sbjct: 44 PTIGVEFAYRNVHVGDKIIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRR 98
>At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putative
similar to GTP binding protein GI:218228 from [Vicia
faba]; identical to cDNA small GTP-binding protein
(Rab11) GI:451859
Length = 216
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +2
Query: 314 QVTYKNLKFQVWDLGGQTSIRPYWRCYYGNTDAIIYVVDSADR 442
+V K +K Q+WD GQ R YY + V D R
Sbjct: 56 KVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR 98
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,003,378
Number of Sequences: 28952
Number of extensions: 319037
Number of successful extensions: 841
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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