Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30841.Seq
         (424 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            24   2.6  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    22   8.0  

>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 32  DNAILLAVKPKLLQKMYEHNGLKATRELYED 124
           DN +   ++P++      H GL A  E  ED
Sbjct: 359 DNVVTKKLRPRIFDPWRHHPGLVAICETMED 389


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = -1

Query: 175 IDHYFMKFNLCWWCPNKIFIQFPSSFQAIMFVHFL*KFWFN 53
           + HY   F    WC + +    P     I F H L    FN
Sbjct: 721 LQHYLNAF--VHWCSSNLLRLCPDKCSVISFSHSLSPISFN 759


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,809
Number of Sequences: 2352
Number of extensions: 7107
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)