Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30838.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    37   4e-04
AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450 pr...    23   5.7  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.5  

>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 37.1 bits (82), Expect = 4e-04
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 9/100 (9%)
 Frame = -3

Query: 509 VQMQADLXGIPXIRPXMMESXALGAAIVAGRAMRVWPTTIPS---------PPADTFLPA 357
           +Q+QADL GIP +R  + E  ALG A+ A +A  V    + +            +TFLP 
Sbjct: 434 MQLQADLSGIPVLRTEVHEPAALGTAMAAAQANGVDLYKLEAEIRGYAGVQSHHETFLPT 493

Query: 356 LTNXXXXXXXXXXXEALNKCMGWTDTXNEHVNAENQIXLL 237
            T             A+ + +GW  +       + +  LL
Sbjct: 494 TTEEERNARYTKWKMAVQRSLGWAVSKKSEAMTDERYSLL 533


>AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450
           protein.
          Length = 86

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 420 SRNACVAHDNTQPTGRYIP 364
           +R AC++ DN Q   R++P
Sbjct: 17  TRVACLSEDNFQQADRFLP 35


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 407 VWPTTIPSPPADTFLPAL 354
           V+P+ +P  P D++ PAL
Sbjct: 302 VFPSVVPLVPLDSYHPAL 319


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,363
Number of Sequences: 2352
Number of extensions: 9490
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)