Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30838.Seq
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084124-1|AAL89862.1|  596|Drosophila melanogaster RE20574p pro...    40   0.003
AE013599-1378|AAG22282.1|  544|Drosophila melanogaster CG8298-PB...    40   0.003
AE013599-1377|AAF58597.1|  596|Drosophila melanogaster CG8298-PA...    40   0.003
AY051535-1|AAK92959.1|  576|Drosophila melanogaster GH18690p pro...    35   0.096
AE014296-346|AAN11497.1|  576|Drosophila melanogaster CG7995-PE,...    35   0.096
AE014296-345|AAN11496.1|  576|Drosophila melanogaster CG7995-PD,...    35   0.096
AE014296-344|AAF47558.2|  576|Drosophila melanogaster CG7995-PC,...    35   0.096
AE014296-343|AAF47560.1|  576|Drosophila melanogaster CG7995-PB,...    35   0.096
AE014296-342|AAF47559.1|  576|Drosophila melanogaster CG7995-PA,...    35   0.096
BT001661-1|AAN71416.1|  474|Drosophila melanogaster RE46914p pro...    34   0.17 
AY051456-1|AAK92880.1|  538|Drosophila melanogaster GH12641p pro...    34   0.17 
AE014296-36|AAN11423.1|  474|Drosophila melanogaster CG18374-PB,...    34   0.17 
AE014296-35|AAF47346.1|  538|Drosophila melanogaster CG18374-PA,...    34   0.17 
AF533772-1|AAN39288.1|  582|Drosophila melanogaster transposase ...    29   6.3  

>AY084124-1|AAL89862.1|  596|Drosophila melanogaster RE20574p
           protein.
          Length = 596

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
 Frame = -3

Query: 518 LSXVQMQADLXGIPXIRPXMMESXALGAAIVAGRAMRV----WPTTIPSPPADTFLPALT 351
           L  VQ  AD+ G    RP       LG  I AG  M+V        + +PP D F P  T
Sbjct: 463 LHLVQFIADIIGYMLERPQTTSPAGLGVMITAGVTMKVVSLEHAVKMYTPPTDVFSPTTT 522

Query: 350 NXXXXXXXXXXXEALNKCMGWTD 282
                        A+ KC+ W +
Sbjct: 523 KNRRELLYKRWAYAVKKCLHWNN 545


>AE013599-1378|AAG22282.1|  544|Drosophila melanogaster CG8298-PB,
           isoform B protein.
          Length = 544

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
 Frame = -3

Query: 518 LSXVQMQADLXGIPXIRPXMMESXALGAAIVAGRAMRV----WPTTIPSPPADTFLPALT 351
           L  VQ  AD+ G    RP       LG  I AG  M+V        + +PP D F P  T
Sbjct: 411 LHLVQFIADIIGYMLERPQTTSPAGLGVMITAGVTMKVVSLEHAVKMYTPPTDVFSPTTT 470

Query: 350 NXXXXXXXXXXXEALNKCMGWTD 282
                        A+ KC+ W +
Sbjct: 471 KNRRELLYKRWAYAVKKCLHWNN 493


>AE013599-1377|AAF58597.1|  596|Drosophila melanogaster CG8298-PA,
           isoform A protein.
          Length = 596

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
 Frame = -3

Query: 518 LSXVQMQADLXGIPXIRPXMMESXALGAAIVAGRAMRV----WPTTIPSPPADTFLPALT 351
           L  VQ  AD+ G    RP       LG  I AG  M+V        + +PP D F P  T
Sbjct: 463 LHLVQFIADIIGYMLERPQTTSPAGLGVMITAGVTMKVVSLEHAVKMYTPPTDVFSPTTT 522

Query: 350 NXXXXXXXXXXXEALNKCMGWTD 282
                        A+ KC+ W +
Sbjct: 523 KNRRELLYKRWAYAVKKCLHWNN 545


>AY051535-1|AAK92959.1|  576|Drosophila melanogaster GH18690p
           protein.
          Length = 576

 Score = 34.7 bits (76), Expect = 0.096
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = -3

Query: 509 VQMQADLXGIPXIRPXMMESXALGAAIVAGRA 414
           +Q+QAD  G+P  R  +M+S A GAA+ A +A
Sbjct: 453 MQLQADTIGMPVFRSQLMDSTAFGAAMCAAQA 484


>AE014296-346|AAN11497.1|  576|Drosophila melanogaster CG7995-PE,
           isoform E protein.
          Length = 576

 Score = 34.7 bits (76), Expect = 0.096
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = -3

Query: 509 VQMQADLXGIPXIRPXMMESXALGAAIVAGRA 414
           +Q+QAD  G+P  R  +M+S A GAA+ A +A
Sbjct: 453 MQLQADTIGMPVFRSQLMDSTAFGAAMCAAQA 484


>AE014296-345|AAN11496.1|  576|Drosophila melanogaster CG7995-PD,
           isoform D protein.
          Length = 576

 Score = 34.7 bits (76), Expect = 0.096
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = -3

Query: 509 VQMQADLXGIPXIRPXMMESXALGAAIVAGRA 414
           +Q+QAD  G+P  R  +M+S A GAA+ A +A
Sbjct: 453 MQLQADTIGMPVFRSQLMDSTAFGAAMCAAQA 484


>AE014296-344|AAF47558.2|  576|Drosophila melanogaster CG7995-PC,
           isoform C protein.
          Length = 576

 Score = 34.7 bits (76), Expect = 0.096
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = -3

Query: 509 VQMQADLXGIPXIRPXMMESXALGAAIVAGRA 414
           +Q+QAD  G+P  R  +M+S A GAA+ A +A
Sbjct: 453 MQLQADTIGMPVFRSQLMDSTAFGAAMCAAQA 484


>AE014296-343|AAF47560.1|  576|Drosophila melanogaster CG7995-PB,
           isoform B protein.
          Length = 576

 Score = 34.7 bits (76), Expect = 0.096
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = -3

Query: 509 VQMQADLXGIPXIRPXMMESXALGAAIVAGRA 414
           +Q+QAD  G+P  R  +M+S A GAA+ A +A
Sbjct: 453 MQLQADTIGMPVFRSQLMDSTAFGAAMCAAQA 484


>AE014296-342|AAF47559.1|  576|Drosophila melanogaster CG7995-PA,
           isoform A protein.
          Length = 576

 Score = 34.7 bits (76), Expect = 0.096
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = -3

Query: 509 VQMQADLXGIPXIRPXMMESXALGAAIVAGRA 414
           +Q+QAD  G+P  R  +M+S A GAA+ A +A
Sbjct: 453 MQLQADTIGMPVFRSQLMDSTAFGAAMCAAQA 484


>BT001661-1|AAN71416.1|  474|Drosophila melanogaster RE46914p
           protein.
          Length = 474

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
 Frame = -3

Query: 509 VQMQADLXGIPXIRPXMMESXALGAAIVAGRAM----RVWPTTIPSPPADTFLPALTNXX 342
           +Q+Q+DL GI  +R  + E+ ALGAA+ A +A+    ++      S P +   P+++   
Sbjct: 381 LQLQSDLVGIQVLRAKIAETTALGAAMAAYKAVENRYQMEAPLSKSGPREAIKPSISATD 440

Query: 341 XXXXXXXXXEALNKCMGW 288
                     A+++ + W
Sbjct: 441 RNLRYQKWKMAIDRSLNW 458


>AY051456-1|AAK92880.1|  538|Drosophila melanogaster GH12641p
           protein.
          Length = 538

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
 Frame = -3

Query: 509 VQMQADLXGIPXIRPXMMESXALGAAIVAGRAM----RVWPTTIPSPPADTFLPALTNXX 342
           +Q+Q+DL GI  +R  + E+ ALGAA+ A +A+    ++      S P +   P+++   
Sbjct: 445 LQLQSDLVGIQVLRAKIAETTALGAAMAAYKAVENRYQMEAPLSKSGPREAIKPSISATD 504

Query: 341 XXXXXXXXXEALNKCMGW 288
                     A+++ + W
Sbjct: 505 RNLRYQKWKMAIDRSLNW 522


>AE014296-36|AAN11423.1|  474|Drosophila melanogaster CG18374-PB,
           isoform B protein.
          Length = 474

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
 Frame = -3

Query: 509 VQMQADLXGIPXIRPXMMESXALGAAIVAGRAM----RVWPTTIPSPPADTFLPALTNXX 342
           +Q+Q+DL GI  +R  + E+ ALGAA+ A +A+    ++      S P +   P+++   
Sbjct: 381 LQLQSDLVGIQVLRAKIAETTALGAAMAAYKAVENRYQMEAPLSKSGPREAIKPSISATD 440

Query: 341 XXXXXXXXXEALNKCMGW 288
                     A+++ + W
Sbjct: 441 RNLRYQKWKMAIDRSLNW 458


>AE014296-35|AAF47346.1|  538|Drosophila melanogaster CG18374-PA,
           isoform A protein.
          Length = 538

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
 Frame = -3

Query: 509 VQMQADLXGIPXIRPXMMESXALGAAIVAGRAM----RVWPTTIPSPPADTFLPALTNXX 342
           +Q+Q+DL GI  +R  + E+ ALGAA+ A +A+    ++      S P +   P+++   
Sbjct: 445 LQLQSDLVGIQVLRAKIAETTALGAAMAAYKAVENRYQMEAPLSKSGPREAIKPSISATD 504

Query: 341 XXXXXXXXXEALNKCMGW 288
                     A+++ + W
Sbjct: 505 RNLRYQKWKMAIDRSLNW 522


>AF533772-1|AAN39288.1|  582|Drosophila melanogaster transposase
           protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 7/58 (12%)
 Frame = +3

Query: 252 IFCVDMFIXSIGPSHAFIQGFFPTNSPHFSFFIGKSRQE-------CIGRWAGYCRGP 404
           I+CVD  I +       ++  F  ++ HF F   +  Q+       C+    G CR P
Sbjct: 285 IYCVDGLIQTTEAIFGLVEDLFKDHTDHFFFLTSRVNQDPLENIFACVRAKGGNCRNP 342


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,604,671
Number of Sequences: 53049
Number of extensions: 436847
Number of successful extensions: 542
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)