Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30837.Seq
(698 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 223 1e-60
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 223 1e-60
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 219 2e-59
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 213 1e-57
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.003
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.8
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.8
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.7
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 8.5
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 223 bits (545), Expect = 1e-60
Identities = 113/146 (77%), Positives = 119/146 (81%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG
Sbjct: 15 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 74
Query: 435 QTREHALLAFTLGVKQLIVGSKQNGSTEPPYSEPRFEGIKKEVSSYIQKIXYKPSCCRLS 614
QTREHALLAFTLGVKQLIVG + STEPPYSE RFE IKKEVSSYI+KI Y P+ ++
Sbjct: 75 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAA--VA 132
Query: 615 VXHFLGWPGDKHVWGPSXQNCLWFKG 692
GW GD + S WFKG
Sbjct: 133 FVPISGWHGDNMLEVSSKMP--WFKG 156
Score = 27.5 bits (58), Expect = 0.13
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 214 WVLDKLKAERE 246
WVLDKLKAERE
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 223 bits (545), Expect = 1e-60
Identities = 113/146 (77%), Positives = 119/146 (81%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 131
Query: 435 QTREHALLAFTLGVKQLIVGSKQNGSTEPPYSEPRFEGIKKEVSSYIQKIXYKPSCCRLS 614
QTREHALLAFTLGVKQLIVG + STEPPYSE RFE IKKEVSSYI+KI Y P+ ++
Sbjct: 132 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAA--VA 189
Query: 615 VXHFLGWPGDKHVWGPSXQNCLWFKG 692
GW GD + S WFKG
Sbjct: 190 FVPISGWHGDNMLEVSSKMP--WFKG 213
Score = 145 bits (352), Expect = 3e-37
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 219 bits (536), Expect = 2e-59
Identities = 111/144 (77%), Positives = 117/144 (81%)
Frame = +3
Query: 261 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 440
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 441 REHALLAFTLGVKQLIVGSKQNGSTEPPYSEPRFEGIKKEVSSYIQKIXYKPSCCRLSVX 620
REHALLAFTLGVKQLIVG + STEPPYSE RFE IKKEVSSYI+KI Y P+ ++
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAA--VAFV 118
Query: 621 HFLGWPGDKHVWGPSXQNCLWFKG 692
GW GD + S WFKG
Sbjct: 119 PISGWHGDNMLEVSSKMP--WFKG 140
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 213 bits (520), Expect = 1e-57
Identities = 108/146 (73%), Positives = 119/146 (81%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 434
TIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNG 131
Query: 435 QTREHALLAFTLGVKQLIVGSKQNGSTEPPYSEPRFEGIKKEVSSYIQKIXYKPSCCRLS 614
QTREHALLAFTLGVKQLIVG + T+PPYSE RFE IKKEVSSYI+KI Y + ++
Sbjct: 132 QTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGY--NTASVA 189
Query: 615 VXHFLGWPGDKHVWGPSXQNCLWFKG 692
GW GD ++ PS + W+KG
Sbjct: 190 FVPISGWHGD-NMLEPSPKT-PWYKG 213
Score = 145 bits (352), Expect = 3e-37
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERE 246
DKLKAERE
Sbjct: 61 DKLKAERE 68
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 404
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.52
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKST 108
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 64 INIVVIGHVDSGKST 108
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 56 FSLPIFG*SRITNCV*Y 6
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 2.8
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -2
Query: 583 IFWMYEDTS-FLIPSNLGSLYGGSVEPFCLLPTMSCLTPRVKASKACSRV*PFLEI 419
I W+ + S F +P NL S ++P+ L +++ L C P E+
Sbjct: 643 ISWLKDGQSPFPLPPNLASANISQLDPYSSLLSITNLAAEHSGDYTCVAANPAAEV 698
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 285 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 285 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 563 ILIHPEDXLQTQLLSAFGXPFLGMARGQTCLGAFXP 670
+L++P D + Q +S+ G+ TC+G P
Sbjct: 344 VLLNPTDKMLVQDISSPDAVEYGIIGPTTCMGDHKP 379
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,104
Number of Sequences: 438
Number of extensions: 4276
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -