Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30834.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   5.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   5.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = -2

Query: 592 RXQHDLGERPRPGRMFRDWNSTRE 521
           + ++ LGE+ RPG++ +  NS R+
Sbjct: 600 KCEYSLGEKCRPGQIIQVANSLRQ 623



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 204  PMVHSTVITRTPQRATS 154
            P VHS+ +   PQ +T+
Sbjct: 1797 PSVHSSTVVPPPQHSTT 1813


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 565 PRPGRMFRDWNSTREMSRRPPTTNFDQ 485
           PRPG     W S  E+++   T+   Q
Sbjct: 96  PRPGSNDNSWESLIEVTKTSETSKLQQ 122


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 101 GPPKGIPALKAHIIANKIDVALWGVRV 181
           GP +    L AH++A    V L G+RV
Sbjct: 333 GPARSRRHLPAHLVAGTCFVQLIGMRV 359


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 687 RTLTSHVTKVSSITNGLIKP 628
           + + SH+  +S ITN  + P
Sbjct: 43  KNIESHLNAISQITNSTLDP 62


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 358 SAHYLFYSLIFMNVVPNLLILVPIFLFALLH 450
           + + LFY  +  +V  NL   VP+ + AL H
Sbjct: 170 TGNVLFYPFLPSDVSYNLFSFVPLVVNALDH 200


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 358 SAHYLFYSLIFMNVVPNLLILVPIFLFALLH 450
           + + LFY  +  +V  NL   VP+ + AL H
Sbjct: 126 TGNVLFYPFLPSDVSYNLFSFVPLVVNALDH 156


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 151 NRRSSLGGPRNHRAVYHWIRV 213
           N R    GPR   AVY  +R+
Sbjct: 179 NIRLKRAGPRTESAVYEPVRI 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,759
Number of Sequences: 336
Number of extensions: 3476
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)