Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30833.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.4  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   4.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.3  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   7.3  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.7  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 481 YCYCIWFLFDQSSAR 525
           Y  CIW+  D+ SA+
Sbjct: 292 YVMCIWYWLDRESAK 306


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 481 YCYCIWFLFDQSSAR 525
           Y  CIW+  D+ SA+
Sbjct: 292 YVMCIWYWLDRESAK 306


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 454 TG*RTYRCQYC 486
           TG R YRC++C
Sbjct: 33  TGERPYRCEHC 43


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 454 TG*RTYRCQYC 486
           TG R YRC++C
Sbjct: 186 TGERPYRCEHC 196


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 449  AEQAKELIDANTVIVFGFFSTRA 517
            A  AKELI+     VF FF   A
Sbjct: 1255 ARIAKELIELRNKSVFAFFMFNA 1277


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 449  AEQAKELIDANTVIVFGFFSTRA 517
            A  AKELI+     VF FF   A
Sbjct: 1255 ARIAKELIELRNKSVFAFFMFNA 1277


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 225 RQQQSWLKKNSYQT 266
           R    W+KK SYQ+
Sbjct: 121 RSPYEWIKKTSYQS 134


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 225 RQQQSWLKKNSYQT 266
           R    W+KK SYQ+
Sbjct: 121 RSPYEWIKKTSYQS 134


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 256 EFFFSQLCCCLGVFRC 209
           E F S L CC  +F C
Sbjct: 93  EVFSSLLSCCSVIFGC 108


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 256 EFFFSQLCCCLGVFRC 209
           E F S L CC  +F C
Sbjct: 93  EVFSSLLSCCSVIFGC 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,394
Number of Sequences: 336
Number of extensions: 3050
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)