Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30833.Seq
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 107 6e-24
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 6e-16
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 70 2e-12
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 64 1e-10
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 61 7e-10
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 61 7e-10
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 60 1e-09
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 57 1e-08
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 55 5e-08
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 43 3e-04
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 40 0.001
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 39 0.004
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 34 0.096
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 34 0.096
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 33 0.29
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 32 0.39
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 29 2.7
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 29 4.8
SB_50939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 28 8.4
SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06) 28 8.4
SB_14152| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_15718| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 107 bits (258), Expect = 6e-24
Identities = 53/111 (47%), Positives = 72/111 (64%)
Frame = +1
Query: 259 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSXIDYSGGRQADDIISWLKKKTGPPAVE 438
IKLAKVDAT E L E + V+GYPT+KFF++G +Y+GGR A +I+SWL KKTGPPA +
Sbjct: 77 IKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAGGRTAPEIVSWLNKKTGPPAKD 136
Query: 439 VTSG*TG*RTYRCQYCYCIWFLFDQSSARAKTFLSTAQVVDDQVFAIVSDE 591
+ + + + + + F D+ S AK FLS A +DD F IVSD+
Sbjct: 137 LATA-DAMKDFITKEVAVVGFFTDKESDAAKAFLSAADGIDDVEFGIVSDK 186
Score = 92.7 bits (220), Expect = 3e-19
Identities = 39/74 (52%), Positives = 56/74 (75%)
Frame = +2
Query: 32 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLA 211
M++L +AL+ LA +E+ EE+VLVL++ NF+ + +++LVEFYAPWCGHCK+LA
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALA 60
Query: 212 PEYAKAATKLAEEE 253
PEYAKAA +L E+
Sbjct: 61 PEYAKAAGQLKSEK 74
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +2
Query: 17 ADNIEMRVLIFTAIALLGLALGDEVPTE---ENVLVLSKANFETVITTTEY-ILVEFYAP 184
++N++ V F L L E+P + + V VL NF+ V + + VEFYAP
Sbjct: 353 SENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAP 412
Query: 185 WCGHCKSLAPEYAKAATK 238
WCGHCK LAP + + K
Sbjct: 413 WCGHCKQLAPIWDQLGEK 430
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +1
Query: 259 IKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGSXIDYSGGRQADDIISWLK---KKTGP 426
I +AK+D+T + E V +PT+K+F + G +DY+GGR DD + +L+ K
Sbjct: 437 IVVAKMDSTANE--VEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLESGGKAGNE 494
Query: 427 PAVE 438
PA E
Sbjct: 495 PAAE 498
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 81.4 bits (192), Expect = 6e-16
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +2
Query: 83 DEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 241
DEV E++V VL+ NF+ VI ILVEFYAPWCGHCKSLAPEYAKAA K+
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKM 107
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +2
Query: 92 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEE 253
P L L+K NF V+ +LVEF+APWCGHCK LAPEY KAA +L + +
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHD 226
Score = 63.3 bits (147), Expect = 2e-10
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +1
Query: 256 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSXIDYSGGRQADDIISWLKKKTGPPAV 435
PI LA VDAT E +LA+ Y V+GYPTLK FR G +Y G R I S+++ + GP +
Sbjct: 228 PIPLAIVDATIESELAQKYEVQGYPTLKVFRKGKATEYKGQRDQYGIASYMRSQVGPSSR 287
Query: 436 EVTSG*TG*RTYRCQYCYCIWFLFD-QSSARAKTFL-STAQVVDDQVFAIVSDEKVIKEF 609
++S + + I FD + +++L + V DD FA D K F
Sbjct: 288 ILSSLKAVQDFMKEKDDVTIMGFFDGEDDKMLESYLEANNDVRDDYPFAHTFDAAAKKHF 347
Query: 610 G 612
G
Sbjct: 348 G 348
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/57 (43%), Positives = 38/57 (66%)
Frame = +1
Query: 256 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSXIDYSGGRQADDIISWLKKKTGP 426
P+ AK+DAT D+A+ + V GYPTLK FR G+ +Y G R+ I+ ++KK++ P
Sbjct: 113 PVPFAKMDATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVEYMKKQSDP 169
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +1
Query: 259 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNG---SXIDYSGGRQADDIISWLKKK 417
I +AK+DAT D+ +Y V G+PT+ F + + I + GGR+ D+I ++++K
Sbjct: 576 IVIAKIDATAN-DVPSTYAVEGFPTIYFATSKDKKNPIKFDGGRELKDLIKFVEEK 630
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 20 DNIEMRVLIFTAIALLGLALGDEVP--TEENVLVLSKANFETVITTTEY-ILVEFYAPWC 190
D++ V F A L + VP +E V V+ F+ ++ + +L+EFYAPWC
Sbjct: 496 DSLREFVEEFKAGNLKPIIKSQPVPKSNKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWC 555
Query: 191 GHCKSLAPEYAK 226
G +L P + K
Sbjct: 556 G--IALEPTFKK 565
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +1
Query: 256 PIKLAKVDATQE-QDLAESYGVRGYPTLKFFRNGSXI-DYSGGRQADDIISWLKKKTGPP 429
P+ LAKVD T+ +D YGV GYPTLK FRNG DY G R + II ++KK+ GP
Sbjct: 590 PVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQAGPS 649
Query: 430 AVEVTS 447
+VE+ S
Sbjct: 650 SVEIKS 655
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +2
Query: 104 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEE 253
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY AA L + +
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKND 588
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +2
Query: 107 VLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 247
V V+ NF+ ++ T+ +L+EFYAPWCGHCKSL P+Y + KL +
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKLQD 911
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 310 YGVRGYPTLKFFRNGSXI-DYSGGRQADDIISWLKKKTG 423
+G+ +PTLK FR G DY+G + + S++ + G
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 486
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/49 (57%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +2
Query: 98 EENVLVLSKANFET-VITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 241
+E+V+ L+ NFE V+ + + LVEF+APWCGHC+ LAPE+AKAAT+L
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATEL 126
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +1
Query: 259 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNG-----SXIDYSGGRQADDIISWLKKK 417
+K+ +DAT A Y V+GYPT+K F G S DY GGR A DII + K
Sbjct: 130 VKVGALDATVHTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYALDK 187
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 292 QDLAESYGVRGYPTLKFF--RNGSXIDYSGGRQADDII 399
Q + Y +RG+PT+K F S DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 61.3 bits (142), Expect = 7e-10
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2
Query: 95 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEY 220
T+ V+ L+K NF+ V+ ++ LVEFYAPWCGHCK LAP Y
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTY 61
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/55 (43%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Frame = +1
Query: 265 LAKVDATQEQDLAESYGVRGYPTLKFFRNGSXI--DYSGGRQADDIISWLKKKTG 423
+AKVDA ++DL + V+G+PT+K+F GS +Y+GGR +D I ++++KTG
Sbjct: 76 IAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKTG 130
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 71 LALGDEVPTEENVLV-LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 241
L D VP +E L+ L +NFE + +++LV+FYAPWC HCK +AP+Y A +L
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKEL 180
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +2
Query: 92 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 247
P VL L+ NF I EY+LV+FYAPWC C+ L+P + AA +L +
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRD 99
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +2
Query: 104 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEE 253
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY AA L + +
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKND 63
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +2
Query: 83 DEVP---TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEE 253
DE P T V+ L F+ + +LV FYAPWCGHCK++ PEY AA L E+E
Sbjct: 73 DEKPWSDTPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQE 132
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +2
Query: 86 EVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA 232
E+P+E V LS F++ + +++LV FYAPWCGHCK PE AA
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAA 238
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 247 RRIPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSXIDYSGGRQADDIISWL-KKKTG 423
RR I A VD T+E + + +GV GY F + Y+ GR+A D I ++ + G
Sbjct: 264 RRRLIAYAAVDCTKEMAVCQQFGVEGY----FNYGKNDFKYTSGREAKDFIQFMDDPREG 319
Query: 424 PP 429
PP
Sbjct: 320 PP 321
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 161 ILVEFYAPWCGHCKSLAPEYAKAATKLAEE 250
+++ Y CG+CK PE+A AAT+ +E
Sbjct: 2 VVIVLYIAGCGYCKRFKPEFAAAATEHKDE 31
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 247 RRIPIKLAKVDATQEQDLAESYGVRGYPT 333
+ IP LA VDAT+E L + + V GYPT
Sbjct: 131 QEIPGVLAAVDATKEAALGKRFKVEGYPT 159
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = +2
Query: 98 EENVLV--LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEE 250
E++ LV L ++F + TE++LV FYAPWCGHCK+ P+Y KAA ++
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQ 196
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 68 GLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 247
G D + V+ L+ + + I + E +LV ++APWCGHC + P Y KAA L +
Sbjct: 39 GYPTSDWSKDDSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHD 98
Query: 248 EE 253
E+
Sbjct: 99 ED 100
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 268 AKVDATQEQDLAESYGVRGYPTLKFFRNGS-XIDYSGGRQADDIISWLKKKTGP 426
AK+D T+ D+ + V GYPTL+++ G ++Y G R +D+IS++++ P
Sbjct: 202 AKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPPLP 255
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 265 LAKVDATQEQDLAESYGVRGYPTLKFFRNGSXIDYSGGRQADDIISWL 408
LA VD T+ +D+A+ + GYPT+K ++ + + + ++ L
Sbjct: 105 LAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKAASAEEDSSLVKQL 152
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +2
Query: 98 EENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEE 250
E + L+ +F+ + E +LV+FYAPWC C +L P+Y KAA LA+E
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKAARDLAKE 71
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +2
Query: 116 LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLA 244
L+ NF+ +I + +LV+FYAPWC HC+ L P+ AA LA
Sbjct: 25 LNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANALA 67
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 113 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 241
V SK F V+ + + +V+FYAPWCG C AP+Y + A L
Sbjct: 438 VNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKML 480
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 71 LALGDEVPTEENVLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAA 232
+AL + NV L +F + +T+ + V+F+APWC C L PEY KAA
Sbjct: 274 IALFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAA 328
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 256 PIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSXIDYSGGRQADDIISWLK 411
P+ VD T L Y +R YPT + N + G A DII +++
Sbjct: 335 PVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNALDIIEFVE 386
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 259 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSXIDYSGGRQADDIISWLKK 414
+ +AKVD T + +L +R YPT+K + +G Y+G R A+D+ ++ K
Sbjct: 19 LTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRNAEDMKVFVDK 70
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 95 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA 232
+E V +L+K F+ I + V+FYAPWC HC LAP + + A
Sbjct: 88 SEAGVHILTKNTFDKHIELGLHF-VKFYAPWCIHCIKLAPIWERLA 132
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 316 VRGYPTLKFFRNG-SXIDYSGGRQADDIISWL 408
+ GYPTL F++G +YSG R D + ++
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +2
Query: 122 KANFETVITTTE--YILVEFYAPWCGHCKSLAPEYAKAATKLAEEEFLS 262
+A F +VI T+ ++++FYA WCG C+ + P++ K A + ++ F +
Sbjct: 18 RAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALEEFKDVFFA 66
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 104 NVLVLS-KANFETVITT--TEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEEFL 259
NV VL + F +T T+ ++ +F A WCG CKS+AP Y+ + K + FL
Sbjct: 8 NVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEKYKQAVFL 62
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 271 KVDATQEQDLAESYGVRGYPTLKFFRNGSXIDYSGGRQADDIISWLKKKTG 423
K+D Q+LA GV PT +FF+N +D G + +KK G
Sbjct: 63 KIDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGADPKALEDAIKKWIG 113
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 104 NVLVLSKANFETVITT---TEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEEFL 259
NV+V+ +F +V + ++++F A WCG CKS+AP + + K + FL
Sbjct: 9 NVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMDVVFL 63
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 271 KVDATQEQDLAESYGVRGYPTLKFFRNGSXID 366
KVD Q Q AES G+R PT F+ N + ID
Sbjct: 64 KVDVDQCQLTAESCGIRAMPTFHFYHNKAKID 95
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.3 bits (75), Expect = 0.096
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 134 ETVITTTEYILVEFYAPWCGHCKSLAP 214
+ VI + +L+ FY PWCG C + AP
Sbjct: 529 DIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 34.3 bits (75), Expect = 0.096
Identities = 10/51 (19%), Positives = 28/51 (54%)
Frame = +2
Query: 101 ENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEE 253
+ ++ + N + + ++++ + FYAPW HC+ + + + A + A+ +
Sbjct: 26 KKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRD 76
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 128 NFETVITTTEYIL--VEFYAPWCGHCKSLAPEYAKAATKLAEEEFLSN*RKLTQLKNRIS 301
+F+ +++++ +L V F+APW HC + + A + F+ N + + ++ +
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAKENPHVNFIKNQKVVDRIDGANA 70
Query: 302 PRAT 313
P T
Sbjct: 71 PELT 74
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 32.3 bits (70), Expect = 0.39
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 131 FETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA 232
F+ + E ++F A WCG C+ + P++ + A
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGPKFEEMA 37
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 167 VEFYAPWCGHCKSLAPEYAKAATKL 241
V FYAPWCG + E+ AA+ L
Sbjct: 457 VFFYAPWCGQSRRAVEEFNIAASLL 481
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 104 NVLVLSKANFETVITTTEYILVEFYA 181
NV++L + NF+ VI + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 316 VRGYPTLKFFRNG-SXIDYSGGRQADDIISWL 408
+ GYPTL F++G +YSG R D + ++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 310 YGVRGYPTLKFFRNGSXI-DYSGGRQADDIISWLKKKTG 423
+G+ +PTLK FR G DY+G + + S++ + G
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 289
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 259 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSXIDYSG 375
+ +A V+ +E +LA+ GV+ + F G ++Y G
Sbjct: 104 VTVAAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYYG 142
>SB_50939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2337
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +3
Query: 207 WHRNT-PRQQQSW--LKKNSYQTSES*RNSRTGSRRELRCTRIPDSQILQEWQXYRLFR 374
WHR T P W L KN T + SR G+R+ L+ + IL ++ LF+
Sbjct: 1471 WHRLTIPSTMNDWPQLSKNVQLTVDDFNASRYGTRQALQQNYLDLQMILDKYNEKVLFK 1529
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 27.9 bits (59), Expect = 8.4
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +2
Query: 185 WCGHCKSLAPEYAKA 229
WCG CK+L P++A++
Sbjct: 8 WCGACKALRPKFAES 22
>SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06)
Length = 257
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 155 EYILVEFYAPWCGHCKSLAPEYAKAAT 235
+YI+ +F CG CK+LAP ++ T
Sbjct: 123 KYIMKKFCQKECGLCKALAPPICQSTT 149
>SB_14152| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 594
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 568 LGHQQLEQLKGKFWLWLSSGRKETKYNNS 482
+GH ++ G WL G+ KYN S
Sbjct: 262 IGHHEIHNTNGWIWLLAMEGKNALKYNAS 290
>SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 198 ANLWHRNTPRQQQSWLKKNSYQTSES*RNSRTGSR 302
+N H++TPR ++ W K+ +E ++R SR
Sbjct: 91 SNAKHKDTPRPKEDWYKETQSSLAEELDDTRQRSR 125
>SB_15718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 712
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -2
Query: 253 FFFSQLCCCLGVFRCQRFAVAAPWSIEFN*NVLRGCNYSFKVSFTQN 113
F F LC G + W+ E + N + GC+Y VS Q+
Sbjct: 147 FEFIDLCSGFGFVVLPTVVICTSWNQESHMNNITGCSYQKPVSTNQS 193
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,556,979
Number of Sequences: 59808
Number of extensions: 356180
Number of successful extensions: 828
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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