Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30832.Seq
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 105 9e-22
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 102 5e-21
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 101 1e-20
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 93 5e-18
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 90 3e-17
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 83 3e-15
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 82 1e-14
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 76 5e-13
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 72 8e-12
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 69 5e-11
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 66 5e-10
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 62 1e-08
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 59 6e-08
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 59 8e-08
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 50 4e-05
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 49 8e-05
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 45 0.001
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 39 0.066
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 36 0.62
UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal ... 35 1.1
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 35 1.1
UniRef50_Q9XTU8 Cluster: Putative uncharacterized protein; n=2; ... 33 5.8
UniRef50_Q60033 Cluster: Endo-1,4-beta-glucanase precursor; n=4;... 32 7.6
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 105 bits (251), Expect = 9e-22
Identities = 51/85 (60%), Positives = 60/85 (70%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIG 434
DWKGLKITV LT+QNRQA I+VVP AA I+A PPRDR KQ NI H+GNI D++
Sbjct: 194 DWKGLKITVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILA 253
Query: 435 IAXIXRNRSMXRYLXXSVKEILXTA 509
IA + R RSM R L + KE+L TA
Sbjct: 254 IARVMRPRSMARELKGTCKEVLGTA 278
Score = 87.8 bits (208), Expect = 1e-16
Identities = 39/50 (78%), Positives = 42/50 (84%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXT 252
MPPKF P E+K+V LRCVGGE GATSSL PKIGPLGLSPK +GDDI K T
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKAT 192
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 102 bits (245), Expect = 5e-21
Identities = 51/97 (52%), Positives = 66/97 (68%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIG 434
DWKGL+ITV+LT+QNRQA I VVP A+ I+A PPRDR KQ NI H+GNI+ +++
Sbjct: 52 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVN 111
Query: 435 IAXIXRNRSMXRYLXXSVKEILXTASXLXVXWKGXRH 545
IA R+RS+ R L ++KEIL TA + G RH
Sbjct: 112 IARQMRHRSLARELSGTIKEILGTAQSVGCNVDG-RH 147
Score = 88.6 bits (210), Expect = 8e-17
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXT 252
MPPKF PNEIK+V LRC GGE GATS+L PKIGPLGLSPK VGDDI K T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAT 50
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 101 bits (241), Expect = 1e-20
Identities = 50/97 (51%), Positives = 65/97 (67%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIG 434
DWKGL+ITV+LT+QNRQA I VVP A+ I+A PPRDR KQ NI H+GNI+ +++
Sbjct: 84 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVN 143
Query: 435 IAXIXRNRSMXRYLXXSVKEILXTASXLXVXWKGXRH 545
I R+RS+ R L ++KEIL TA + G RH
Sbjct: 144 IVRQMRHRSLARELSGTIKEILGTAQSVGCNVDG-RH 179
Score = 88.6 bits (210), Expect = 8e-17
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXT 252
MPPKF PNEIK+V LRC GGE GATS+L PKIGPLGLSPK VGDDI K T
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAT 82
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 92.7 bits (220), Expect = 5e-18
Identities = 45/86 (52%), Positives = 59/86 (68%)
Frame = +3
Query: 252 KDWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVI 431
KDWKGL++TV+LTVQNRQA ++VVP A+ I+A P +DR K I H GN SL D+I
Sbjct: 114 KDWKGLRVTVKLTVQNRQAKVSVVPTASALVIKALKEPFQDRKKVKGITHTGNCSLDDII 173
Query: 432 GIAXIXRNRSMXRYLXXSVKEILXTA 509
+A + R +S + L +VKEIL TA
Sbjct: 174 EVARVMRPKSCAKNLAGTVKEILGTA 199
Score = 73.3 bits (172), Expect = 3e-12
Identities = 34/51 (66%), Positives = 37/51 (72%)
Frame = +1
Query: 100 KMPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXT 252
KMPPKF PN + +R GGE GA SSL PKIGPLGLSPK VG+DI K T
Sbjct: 62 KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKET 112
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 90.2 bits (214), Expect = 3e-17
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +3
Query: 261 KGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIGIA 440
KGL++TV+LT+QNRQA ++VVP A+ I+A PPRDR K+ NI HN +I L D+I IA
Sbjct: 78 KGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEKNIKHNKSIPLDDIIEIA 137
Query: 441 XIXRNRSMXRYLXXSVKEILXTA 509
R+RS+ + L +V EIL TA
Sbjct: 138 RTMRSRSLAKELKGTVLEILGTA 160
Score = 80.6 bits (190), Expect = 2e-14
Identities = 34/50 (68%), Positives = 41/50 (82%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXT 252
MPPKF PNE+K+++LR GGE GA S+L PKIGPLGLSPK +G+DI K T
Sbjct: 1 MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNT 50
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 83.4 bits (197), Expect = 3e-15
Identities = 40/89 (44%), Positives = 54/89 (60%)
Frame = +3
Query: 252 KDWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVI 431
+ WKGLKI V+LT+QNRQA I VVP +A ++ PRDR K NI HNGN+ + V
Sbjct: 63 QSWKGLKICVKLTIQNRQAKIEVVPTSASMVLKELNEAPRDRKKVKNIKHNGNLKIEQVY 122
Query: 432 GIAXIXRNRSMXRYLXXSVKEILXTASXL 518
IA + +S + +VKEIL T + +
Sbjct: 123 SIARAMKEKSRAKEFRGTVKEILGTCNSI 151
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +1
Query: 139 VNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXTRT 258
V +R VGGE GA+S L PK+GPLGLSPK +GDDI K T++
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQS 64
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 81.8 bits (193), Expect = 1e-14
Identities = 41/86 (47%), Positives = 51/86 (59%)
Frame = +3
Query: 252 KDWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVI 431
KDWKGLK+T QL V+NR A + V P A IRA PPRDR K NI H+GNI+ +++
Sbjct: 106 KDWKGLKVTCQLRVKNRVATVIVTPSVASRLIRALKEPPRDRKKVKNIKHDGNIAFSEIL 165
Query: 432 GIAXIXRNRSMXRYLXXSVKEILXTA 509
IA SM + V E+L TA
Sbjct: 166 KIAKESAPNSMGASMKSVVMEVLGTA 191
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +1
Query: 100 KMPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXTRTGRXSRSL 279
KMPPKF PN+ V +R VGGE AT+SL PK+GPLGL+ K +G+DI K T+ + +
Sbjct: 55 KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114
Query: 280 CS*QFK 297
C + K
Sbjct: 115 CQLRVK 120
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 76.2 bits (179), Expect = 5e-13
Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIG 434
D+K LK+ VQL +++R+A + V P A I++ PPRDR K+ NI HNG++ + +V+
Sbjct: 52 DYKSLKVHVQLAIKDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVD 111
Query: 435 IAXIXR-NRSMXRYLXXSVKEILXTASXL 518
IA I R +RS L +VKE+L T +
Sbjct: 112 IARIARSSRSYSNSLSGTVKEVLGTCKSI 140
Score = 41.9 bits (94), Expect = 0.009
Identities = 23/43 (53%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +1
Query: 127 EIKIVNLRCVGGEX-GATSSLXPKIGPLGLSPKXVGDDIXKXT 252
+ K + L+ VGGE GAT L ++GPLGLS K VG+DI K T
Sbjct: 10 DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKAT 50
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 72.1 bits (169), Expect = 8e-12
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = +3
Query: 258 WKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIGI 437
WKG+++ V L QNR A + V+P ++ I+ RDR K N+ HNGN++L VI +
Sbjct: 53 WKGIRVMVNLRCQNRNADVTVIPTSSALLIKEIGGYERDRKKTKNVKHNGNLTLEQVIKV 112
Query: 438 AXIXRNRSMXRYLXXSVKEILXTASXL 518
A +S+ + +VK++L TA L
Sbjct: 113 ARAVEEKSLAKTFTGTVKQVLGTAQSL 139
Score = 68.1 bits (159), Expect = 1e-10
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDI 240
MPPK PNE++++N++ GGE G S+L PK+GPLGL+PK VGD I
Sbjct: 1 MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKI 46
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 69.3 bits (162), Expect = 5e-11
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = +3
Query: 285 LTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIGIAXIXRNRSM 464
L+ + QA I VVP A+ I+A P RDR KQ NI H+GNI+ +++ IA R+RS+
Sbjct: 165 LSPKKGQAQIEVVPSASALIIKALKEPARDRKKQKNIKHSGNITSDEIVNIARQMRHRSL 224
Query: 465 XRYLXXSVKEILXTASXLXVXWKGXRH 545
R L ++KE+L TA L G RH
Sbjct: 225 DRELSGTIKELLGTAQSLGCNVDG-RH 250
Score = 56.4 bits (130), Expect = 4e-07
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = +1
Query: 109 PKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPK 222
PKF P EIK+ LRC G E A S+L PKI PLGLSPK
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPK 168
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 66.1 bits (154), Expect = 5e-10
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXN 392
DWKGL+ITV+LT+QNRQA I VVP A+ I+A PPRDR KQ N
Sbjct: 145 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKN 190
Score = 64.9 bits (151), Expect = 1e-09
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = +1
Query: 139 VNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXT 252
V LRC GGE GATS+L PKIGPLGLSPK VGDDI K T
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAT 143
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGL 213
MPPKF NEI+ V LRC GGE GAT+SL PKIGPLGL
Sbjct: 1 MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
Score = 46.8 bits (106), Expect = 3e-04
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3
Query: 390 NIXHNGNISLXDVIGIAXIXRNRSMXRYLXXSVKEILXT 506
++ HNGNI+L DV +A + R RSM R+L +VKEIL T
Sbjct: 67 SVKHNGNITLDDVTNVAKVMRPRSMARHLSGTVKEILGT 105
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 59.3 bits (137), Expect = 6e-08
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +1
Query: 136 IVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXTRT 258
IV +R VGGE GA+S L PK+GPLGLSPK +GDDI K T++
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQS 73
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 58.8 bits (136), Expect = 8e-08
Identities = 30/65 (46%), Positives = 40/65 (61%)
Frame = +3
Query: 351 AXXXPPRDRXKQXNIXHNGNISLXDVIGIAXIXRNRSMXRYLXXSVKEILXTASXLXVXW 530
A PPRDR KQ NI H+GNI+ +++ IA R+RS+ R L ++KEIL TA +
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNV 233
Query: 531 KGXRH 545
G RH
Sbjct: 234 DG-RH 237
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 50.0 bits (114), Expect = 4e-05
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXTR 255
MPP+ PN ++ LR GG A ++L PKIGP GL PK VG+ I + T+
Sbjct: 1 MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQ 51
Score = 49.6 bits (113), Expect = 5e-05
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +3
Query: 258 WKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIGI 437
+KG+++ V++ +NRQ ++VVP A+ ++A PR K + H G + V+ I
Sbjct: 53 YKGIRVKVRIVSKNRQPTVSVVPTASSLLVKALGEGPRTIPKGQPLLHTGTVKFDTVLDI 112
Query: 438 AXIXRNRSMXRYLXXSVKEILXTASXL--XVXWKG 536
A R S +V E+L +A + V +KG
Sbjct: 113 AKELRANSFALKYAGTVLEVLGSARSVGCKVEYKG 147
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 48.8 bits (111), Expect = 8e-05
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = -1
Query: 254 LVXLXMSSPTFXGDXPRGPIXGXKDDVAPXSPPTHRKF 141
LV L +SSPTF GD P GPI G K AP SPPT K+
Sbjct: 54 LVALAISSPTFFGDKPNGPIFGAKAAEAPTSPPTALKY 91
Score = 45.6 bits (103), Expect = 8e-04
Identities = 26/64 (40%), Positives = 28/64 (43%)
Frame = -2
Query: 412 MXPLCXIFXCFXRSRGGXLXALXIXXAAXGTTAIXACLF*TVSCTVILXPFQSLXPWXCH 233
M PLC F F S GG A+ A GTT ACLF + TV L P SL
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 232 HPXF 221
P F
Sbjct: 61 SPTF 64
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +1
Query: 133 KIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXTR 255
K+V ++ GG+ + S L KIGP GLSPK +G+D K T+
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTK 47
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 39.1 bits (87), Expect = 0.066
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = -3
Query: 264 PSSPCXLGNVITHXFXRQXKRXDFXXQR*CGXXFPADTSQIHDFNFIWVKLRGH 103
P + C LG+VI H F RQ + + Q G P Q+HDF+ + V+L H
Sbjct: 97 PITSC-LGDVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQVHDFDLVGVELGWH 149
Score = 35.5 bits (78), Expect = 0.82
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = -1
Query: 437 NADYIXKGDVXVVXDIXLLXTVTRRXXXGSDXXXCCXGNNSYXGLSVLNCQLHSDLEXLP 258
N D + KGDV V + LL +V+ G D + LSVL+ Q HSD + LP
Sbjct: 38 NVDNLIKGDVSTVLYVFLLLSVSWWFLEGFDDQGRGRRYHLNLSLSVLDRQFHSDPQTLP 97
Query: 257 V 255
+
Sbjct: 98 I 98
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 35.9 bits (79), Expect = 0.62
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -3
Query: 246 LGNVITHXFXRQXKRXDFXXQR*CGXXFPADTSQIHDFNFIWVKLRGHFV 97
LG++ T+ Q + + Q F D+SQ+ +FIW+KL HFV
Sbjct: 133 LGDIFTNLLWGQTQWTNLWSQSSGSTNFTTDSSQVQVLDFIWIKLWRHFV 182
>UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal
protein L12; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L12 - Mus musculus
Length = 142
Score = 35.1 bits (77), Expect = 1.1
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 384 QXNIXHNGNISLXDVIGIAXIXRNRSMXRYLXXSVKEILXTA 509
Q +I H+G+IS + + R+RS+ R L ++KEIL T+
Sbjct: 72 QKSIKHSGSISFDEFVNTVWQMRHRSLARELSGTIKEILGTS 113
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 35.1 bits (77), Expect = 1.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 247 PWXCHHPXFXETXQEXRFXGPKMMWXR 167
PW CHH F ET R GP W R
Sbjct: 91 PWQCHHQPFLETDPGGRSWGPGQKWHR 117
>UniRef50_Q9XTU8 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 436
Score = 32.7 bits (71), Expect = 5.8
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 117 KLRGHFVDYLVQLYTIITLNPNGWVWIPQGYRLNVQR 7
K R +D L +L TI GWVW+ G + NVQR
Sbjct: 305 KCRKQKIDMLNELATIFKKRSFGWVWMEGGAQENVQR 341
>UniRef50_Q60033 Cluster: Endo-1,4-beta-glucanase precursor; n=4;
Thermotoga|Rep: Endo-1,4-beta-glucanase precursor -
Thermotoga maritima
Length = 274
Score = 32.3 bits (70), Expect = 7.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 123 WVKLRGHFVDYLVQLYTIITLNPNGWV 43
W+K G V++ LY I+ NP+ WV
Sbjct: 54 WLKFDGEKVEFYADLYNIVLQNPDSWV 80
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,359,327
Number of Sequences: 1657284
Number of extensions: 5154094
Number of successful extensions: 8415
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 8250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8413
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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