Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30832.Seq
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 102 7e-22
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 102 7e-22
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 102 7e-22
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 102 7e-22
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 102 7e-22
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 101 2e-21
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 100 3e-21
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 69 1e-11
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 35 0.16
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 35 0.16
BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member ... 32 1.2
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 102 bits (245), Expect = 7e-22
Identities = 51/97 (52%), Positives = 66/97 (68%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIG 434
DWKGL+ITV+LT+QNRQA I VVP A+ I+A PPRDR KQ NI H+GNI+ +++
Sbjct: 52 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVN 111
Query: 435 IAXIXRNRSMXRYLXXSVKEILXTASXLXVXWKGXRH 545
IA R+RS+ R L ++KEIL TA + G RH
Sbjct: 112 IARQMRHRSLARELSGTIKEILGTAQSVGCNVDG-RH 147
Score = 88.6 bits (210), Expect = 1e-17
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXT 252
MPPKF PNEIK+V LRC GGE GATS+L PKIGPLGLSPK VGDDI K T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAT 50
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 102 bits (245), Expect = 7e-22
Identities = 51/97 (52%), Positives = 66/97 (68%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIG 434
DWKGL+ITV+LT+QNRQA I VVP A+ I+A PPRDR KQ NI H+GNI+ +++
Sbjct: 52 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVN 111
Query: 435 IAXIXRNRSMXRYLXXSVKEILXTASXLXVXWKGXRH 545
IA R+RS+ R L ++KEIL TA + G RH
Sbjct: 112 IARQMRHRSLARELSGTIKEILGTAQSVGCNVDG-RH 147
Score = 88.6 bits (210), Expect = 1e-17
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXT 252
MPPKF PNEIK+V LRC GGE GATS+L PKIGPLGLSPK VGDDI K T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAT 50
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 102 bits (245), Expect = 7e-22
Identities = 51/97 (52%), Positives = 66/97 (68%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIG 434
DWKGL+ITV+LT+QNRQA I VVP A+ I+A PPRDR KQ NI H+GNI+ +++
Sbjct: 52 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVN 111
Query: 435 IAXIXRNRSMXRYLXXSVKEILXTASXLXVXWKGXRH 545
IA R+RS+ R L ++KEIL TA + G RH
Sbjct: 112 IARQMRHRSLARELSGTIKEILGTAQSVGCNVDG-RH 147
Score = 88.6 bits (210), Expect = 1e-17
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXT 252
MPPKF PNEIK+V LRC GGE GATS+L PKIGPLGLSPK VGDDI K T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAT 50
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 102 bits (245), Expect = 7e-22
Identities = 51/97 (52%), Positives = 66/97 (68%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIG 434
DWKGL+ITV+LT+QNRQA I VVP A+ I+A PPRDR KQ NI H+GNI+ +++
Sbjct: 52 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVN 111
Query: 435 IAXIXRNRSMXRYLXXSVKEILXTASXLXVXWKGXRH 545
IA R+RS+ R L ++KEIL TA + G RH
Sbjct: 112 IARQMRHRSLARELSGTIKEILGTAQSVGCNVDG-RH 147
Score = 88.6 bits (210), Expect = 1e-17
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXT 252
MPPKF PNEIK+V LRC GGE GATS+L PKIGPLGLSPK VGDDI K T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAT 50
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 102 bits (245), Expect = 7e-22
Identities = 51/97 (52%), Positives = 66/97 (68%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIG 434
DWKGL+ITV+LT+QNRQA I VVP A+ I+A PPRDR KQ NI H+GNI+ +++
Sbjct: 52 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVN 111
Query: 435 IAXIXRNRSMXRYLXXSVKEILXTASXLXVXWKGXRH 545
IA R+RS+ R L ++KEIL TA + G RH
Sbjct: 112 IARQMRHRSLARELSGTIKEILGTAQSVGCNVDG-RH 147
Score = 88.6 bits (210), Expect = 1e-17
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXT 252
MPPKF PNEIK+V LRC GGE GATS+L PKIGPLGLSPK VGDDI K T
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAT 50
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 101 bits (241), Expect = 2e-21
Identities = 50/97 (51%), Positives = 65/97 (67%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIG 434
DWKGL+ITV+LT+QNRQA I VVP A+ I+A PPRDR KQ NI H+GNI+ +++
Sbjct: 84 DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVN 143
Query: 435 IAXIXRNRSMXRYLXXSVKEILXTASXLXVXWKGXRH 545
I R+RS+ R L ++KEIL TA + G RH
Sbjct: 144 IVRQMRHRSLARELSGTIKEILGTAQSVGCNVDG-RH 179
Score = 88.6 bits (210), Expect = 1e-17
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXT 252
MPPKF PNEIK+V LRC GGE GATS+L PKIGPLGLSPK VGDDI K T
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAT 82
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 100 bits (240), Expect = 3e-21
Identities = 47/88 (53%), Positives = 62/88 (70%)
Frame = +3
Query: 255 DWKGLKITVQLTVQNRQAXIAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIG 434
DWKGL+ITV+LT++NRQA I VVP A+ I+A PPRDR KQ NI HNGNI+ +++
Sbjct: 52 DWKGLRITVKLTIENRQAQIEVVPSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVN 111
Query: 435 IAXIXRNRSMXRYLXXSVKEILXTASXL 518
IA R+RS+ R L ++KEI TA +
Sbjct: 112 IARQMRHRSLARELSGTIKEIPGTAQSM 139
Score = 85.4 bits (202), Expect = 1e-16
Identities = 39/50 (78%), Positives = 41/50 (82%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGLSPKXVGDDIXKXT 252
MPPKF PNEIK+V LRC GE GATS+L PKIGPLGLSPK VGDDI K T
Sbjct: 1 MPPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKAT 50
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 68.9 bits (161), Expect = 1e-11
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +1
Query: 103 MPPKFXPNEIKIVNLRCVGGEXGATSSLXPKIGPLGL 213
MPPKF PNEIK+V LRC GGE GATS+L PKIGPLGL
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGL 37
Score = 68.9 bits (161), Expect = 1e-11
Identities = 36/78 (46%), Positives = 48/78 (61%)
Frame = +3
Query: 312 IAVVPXAAXXXIRAXXXPPRDRXKQXNIXHNGNISLXDVIGIAXIXRNRSMXRYLXXSVK 491
I VVP A+ I+A PPRDR KQ NI H+GNI+ +++ IA R+RS+ R L ++K
Sbjct: 38 IEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIK 97
Query: 492 EILXTASXLXVXWKGXRH 545
EIL TA + G RH
Sbjct: 98 EILGTAQSVGCNVDG-RH 114
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 35.1 bits (77), Expect = 0.16
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 247 PWXCHHPXFXETXQEXRFXGPKMMWXR 167
PW CHH F ET R GP W R
Sbjct: 91 PWQCHHQPFLETDPGGRSWGPGQKWHR 117
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 35.1 bits (77), Expect = 0.16
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 247 PWXCHHPXFXETXQEXRFXGPKMMWXR 167
PW CHH F ET R GP W R
Sbjct: 91 PWQCHHQPFLETDPGGRSWGPGQKWHR 117
>BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 32.3 bits (70), Expect = 1.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 247 PWXCHHPXFXETXQEXRFXGPKMMWXR 167
PW CHH F T R GP W R
Sbjct: 91 PWQCHHQPFLVTDPGGRSWGPGQKWHR 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,765,248
Number of Sequences: 237096
Number of extensions: 789300
Number of successful extensions: 965
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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