Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30830.Seq
         (535 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   0.73 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   3.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   6.8  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 29  GLPPRHQGLVRSQVPHTWNYSALHVHESVQSW 124
           G+   H GL  S V  T N   L V  +++ W
Sbjct: 215 GVTGHHSGLYPSAVDTTTNQKLLTVDAAIRGW 246


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 171 PHKVYHGKTGR 203
           PH  Y GKTGR
Sbjct: 302 PHPTYFGKTGR 312


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = +2

Query: 71  PHT-WNYSALHVHESVQSW 124
           PH  W Y  L+V++ +Q W
Sbjct: 234 PHDQWAYEKLNVNDGLQLW 252


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 267 YRSASXSVXXXSSTPSADKTSLRESKR 347
           YRSA+      +S+  A  TSLR   R
Sbjct: 341 YRSATGGNSASNSSGDAQSTSLRPFSR 367


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 217 VTLXTRPVXPWYTLCGIP 164
           V L    +  WYT+C +P
Sbjct: 9   VNLGLNGLIDWYTVCLVP 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,773
Number of Sequences: 336
Number of extensions: 1411
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)