Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30829.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    25   1.4  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   9.9  

>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -1

Query: 568 GAICGKNWXAXGRESF--IVADMGEVYIQPVE 479
           GA+ GK   A G      +VADMGEV I  ++
Sbjct: 129 GAVLGKIHEAVGESGTARVVADMGEVIIPNID 160


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +1

Query: 4   PKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLED 108
           PK+ + G+VL+V  ++ L  M V    + +  + D
Sbjct: 764 PKVFMLGIVLAVIAVVVLIGMAVLLLWKVLTSIHD 798


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,289
Number of Sequences: 2352
Number of extensions: 8376
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)