Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30828.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   2.6  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   3.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   3.4  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   3.4  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   3.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   3.4  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   6.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 101  SQLWKSSSRSPW*TMTES--WGDRRPSSMITPTK 196
            S  W S++ SPW T T +      RP++  T T+
Sbjct: 1040 STWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTR 1073


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 199 ILGGGNHR*RPPVPPRF 149
           +L  G H   PPVPP F
Sbjct: 684 VLQVGTHADLPPVPPNF 700


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +3

Query: 354 EKVIAHPEYDNPAF-DKDVAVMKTKEPIQFSDTMQPIGLPSMDRAMXGGT 500
           E VIA PEY N  F     ++   K+   + D +  +     +R M  G+
Sbjct: 448 EMVIAEPEYTNICFWYVPKSLRGRKDEADYKDKLHKVAPRIKERMMKEGS 497


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 330 SAMNFHLLRPLSRG 289
           +++NFH L P SRG
Sbjct: 200 TSVNFHYLSPQSRG 213


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 330 SAMNFHLLRPLSRG 289
           +++NFH L P SRG
Sbjct: 200 TSVNFHYLSPQSRG 213


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 330 SAMNFHLLRPLSRG 289
           +++NFH L P SRG
Sbjct: 200 TSVNFHYLSPQSRG 213


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 330 SAMNFHLLRPLSRG 289
           +++NFH L P SRG
Sbjct: 200 TSVNFHYLSPQSRG 213


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -1

Query: 481 LSIEGSPIGCIVSLNCIGSLVFITATSLSNAGLS 380
           LS+EG+PI  + + + +G+   +   +L N  L+
Sbjct: 518 LSLEGNPITTLSNTSLLGAANQLEELNLKNIDLT 551


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 330 SAMNFHLLRPLSRG 289
           ++ NFH L P SRG
Sbjct: 200 TSANFHYLSPQSRG 213


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 555 SGIEAAPCLVRPHXLTIPPFH 493
           + + AA  L+RPH    P FH
Sbjct: 99  ANMAAAANLLRPHPYLSPLFH 119


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 318 FHLLRPLSRGRRSESNG 268
           FH   P+  GR+++ NG
Sbjct: 423 FHCYCPIKFGRKADPNG 439


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,309
Number of Sequences: 336
Number of extensions: 3451
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)