BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= psV30826.Seq (698 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY058593-1|AAL13822.1| 767|Drosophila melanogaster LD28817p pro... 57 3e-08 AE014297-1398|AAF54712.1| 767|Drosophila melanogaster CG6962-PA... 57 3e-08 >AY058593-1|AAL13822.1| 767|Drosophila melanogaster LD28817p protein. Length = 767 Score = 56.8 bits (131), Expect = 3e-08 Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%) Frame = +1 Query: 256 VIELTRIIDQSSSTKDLQTIFPQLINNIFSSSFST-GWDLKSITCDVNRYEFEALISFLE 432 V EL+ + D+ S + +Q IFP ++++IF + GW L++ T + N +F+ L F Sbjct: 26 VHELSILFDRCS-LRQVQEIFPHVVHSIFGIDGNPLGWGLRTTTLENNPVQFQTLHQFFG 84 Query: 433 PQGPMFRLCYRLLSDTQLKYELPLN 507 GP+ +C+RLL D Q K+EL +N Sbjct: 85 VCGPLMHVCHRLLVD-QYKFELDIN 108 >AE014297-1398|AAF54712.1| 767|Drosophila melanogaster CG6962-PA protein. Length = 767 Score = 56.8 bits (131), Expect = 3e-08 Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%) Frame = +1 Query: 256 VIELTRIIDQSSSTKDLQTIFPQLINNIFSSSFST-GWDLKSITCDVNRYEFEALISFLE 432 V EL+ + D+ S + +Q IFP ++++IF + GW L++ T + N +F+ L F Sbjct: 26 VHELSILFDRCS-LRQVQEIFPHVVHSIFGIDGNPLGWGLRTTTLENNPVQFQTLHQFFG 84 Query: 433 PQGPMFRLCYRLLSDTQLKYELPLN 507 GP+ +C+RLL D Q K+EL +N Sbjct: 85 VCGPLMHVCHRLLVD-QYKFELDIN 108 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 27,703,070 Number of Sequences: 53049 Number of extensions: 536784 Number of successful extensions: 851 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 842 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 851 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3067209849 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -