Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30822.Seq
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16RN6 Cluster: Adp,atp carrier protein; n=1; Aedes aeg...    44   0.005
UniRef50_P12236 Cluster: ADP/ATP translocase 3; n=11; Euteleosto...    40   0.078
UniRef50_P05141 Cluster: ADP/ATP translocase 2; n=61; Eukaryota|...    38   0.24 
UniRef50_P12235 Cluster: ADP/ATP translocase 1; n=108; Eukaryota...    38   0.24 
UniRef50_Q9H0C2 Cluster: ADP/ATP translocase 4; n=17; Eukaryota|...    35   2.2  
UniRef50_A6LT70 Cluster: Phage portal protein, SPP1; n=1; Clostr...    33   5.1  

>UniRef50_Q16RN6 Cluster: Adp,atp carrier protein; n=1; Aedes
           aegypti|Rep: Adp,atp carrier protein - Aedes aegypti
           (Yellowfever mosquito)
          Length = 257

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +1

Query: 1   LRGTGGAFVLVLYDEIKKVL 60
           LRGTGGAFVLVLYDEIKKVL
Sbjct: 238 LRGTGGAFVLVLYDEIKKVL 257


>UniRef50_P12236 Cluster: ADP/ATP translocase 3; n=11;
           Euteleostomi|Rep: ADP/ATP translocase 3 - Homo sapiens
           (Human)
          Length = 298

 Score = 39.5 bits (88), Expect = 0.078
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +1

Query: 1   LRGTGGAFVLVLYDEIKKVL 60
           LRG GGAFVLVLYDE+KKV+
Sbjct: 279 LRGMGGAFVLVLYDELKKVI 298


>UniRef50_P05141 Cluster: ADP/ATP translocase 2; n=61;
           Eukaryota|Rep: ADP/ATP translocase 2 - Homo sapiens
           (Human)
          Length = 298

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +1

Query: 1   LRGTGGAFVLVLYDEIKK 54
           LRG GGAFVLVLYDEIKK
Sbjct: 279 LRGMGGAFVLVLYDEIKK 296


>UniRef50_P12235 Cluster: ADP/ATP translocase 1; n=108;
           Eukaryota|Rep: ADP/ATP translocase 1 - Homo sapiens
           (Human)
          Length = 298

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +1

Query: 1   LRGTGGAFVLVLYDEIKK 54
           LRG GGAFVLVLYDEIKK
Sbjct: 279 LRGMGGAFVLVLYDEIKK 296


>UniRef50_Q9H0C2 Cluster: ADP/ATP translocase 4; n=17;
           Eukaryota|Rep: ADP/ATP translocase 4 - Homo sapiens
           (Human)
          Length = 315

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +1

Query: 1   LRGTGGAFVLVLYDEIKK 54
           LRGTGGA VLVLYD+IK+
Sbjct: 289 LRGTGGALVLVLYDKIKE 306


>UniRef50_A6LT70 Cluster: Phage portal protein, SPP1; n=1;
           Clostridium beijerinckii NCIMB 8052|Rep: Phage portal
           protein, SPP1 - Clostridium beijerinckii NCIMB 8052
          Length = 462

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 20/68 (29%), Positives = 29/68 (42%)
 Frame = -1

Query: 656 PHHQFNRSQCQRYHNQLQNPHDFTFNSHNVYRSQKYTT*LCQTHSRCVRKVEILNSHKTQ 477
           PHH    ++C R  N L   H+       VY++QK+T      H+       ILN H   
Sbjct: 26  PHHIMRIAKCFRLKNYLHGKHEVLNRQDTVYKNQKFTVRKIVLHN----TKTILNFHSNY 81

Query: 476 I*NRQ*TL 453
           +  +  TL
Sbjct: 82  LLGKPVTL 89


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,998,381
Number of Sequences: 1657284
Number of extensions: 11264349
Number of successful extensions: 18147
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18130
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)