Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30822.Seq
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   1.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    24   1.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    24   1.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.8  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    23   3.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.7  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.7  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   9.7  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 374 LHNSRSPNYVMSHKKN*SFFILN 306
           L +S  PNY++   KN ++ +LN
Sbjct: 11  LDSSTQPNYLILSNKNNTYLVLN 33


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -1

Query: 668 NY*VPHHQFNRSQCQRYHNQLQNPHDFTFNSHNVYR 561
           NY  P+ + + +   R+H ++ + H   F   N Y+
Sbjct: 102 NYNEPYQRTHENMLLRHHEEVADGHQHHFLHENKYQ 137


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -1

Query: 668 NY*VPHHQFNRSQCQRYHNQLQNPHDFTFNSHNVYR 561
           NY  P+ + + +   R+H ++ + H   F   N Y+
Sbjct: 102 NYNEPYQRTHENMLLRHHEEVADGHQHHFLHENKYQ 137


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -1

Query: 668 NY*VPHHQFNRSQCQRYHNQLQNPHDFTFNSHNVYR 561
           NY  P+ + + +   R+H ++ + H   F   N Y+
Sbjct: 102 NYNEPYQRTHENMLLRHHEEVADGHQHHFLHENKYQ 137


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
 Frame = -3

Query: 234 QLCNT**NNKLWNHCITL--------YLTKNKLLKSFSCLIIHDLRGVAATRNHIE 91
           Q+C     N +W+HC  +         LT N+++   S  +    + V    NHIE
Sbjct: 138 QVCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPSIQVCEGDKVVIDVENHIE 193


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
 Frame = -3

Query: 234 QLCNT**NNKLWNHCITL--------YLTKNKLLKSFSCLIIHDLRGVAATRNHIE 91
           Q+C     N +W+HC  +         LT N+++   S  +    + V    NHIE
Sbjct: 138 QVCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPSIQVCEGDKVVIDVENHIE 193


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 174 LNKVLYNDSIIYCFIKCYIIACPN*SE 254
           ++K+L ND ++  +IKC +   P  SE
Sbjct: 32  VDKILNNDRVLTNYIKCLMDEGPCTSE 58


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -2

Query: 637 GHNVSVTIISFKIHMILHLIAIM 569
           G+ V+   + FK++ I+H+  I+
Sbjct: 15  GNTVTPVSLRFKLYTIVHIFIII 37


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 491 N*EFPLFLHSG 523
           N EFP F+HSG
Sbjct: 66  NAEFPEFVHSG 76


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 491 N*EFPLFLHSG 523
           N EFP F+HSG
Sbjct: 66  NAEFPEFVHSG 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,577
Number of Sequences: 336
Number of extensions: 3358
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)