Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30818.Seq
         (461 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M73031-1|AAA58630.1|  108|Homo sapiens coupling factor 6 protein.      38   0.022
M37104-1|AAA51807.1|  108|Homo sapiens ATPase coupling factor 6 ...    38   0.022
CR456950-1|CAG33231.1|  108|Homo sapiens ATP5J protein.                38   0.022
BT007244-1|AAP35908.1|  108|Homo sapiens ATP synthase, H+ transp...    38   0.022
BC066310-1|AAH66310.1|  108|Homo sapiens ATP synthase, H+ transp...    38   0.022
BC001178-1|AAH01178.1|  108|Homo sapiens ATP synthase, H+ transp...    38   0.022
AY544129-1|AAT11160.1|  108|Homo sapiens proliferation-inducing ...    38   0.022

>M73031-1|AAA58630.1|  108|Homo sapiens coupling factor 6 protein.
          Length = 108

 Score = 37.5 bits (83), Expect = 0.022
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -1

Query: 323 AAQKATDPIQQLFLDKIREYKQKARVAKSQMPA 225
           A  K  DPIQ+LF+DKIREYK K + +   + A
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPVDA 63



 Score = 29.9 bits (64), Expect = 4.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 153 DMTAFPSLKFEEPKLDPIDEQAA 85
           DM  FP+ KFE+PK + I++  A
Sbjct: 86  DMNTFPTFKFEDPKFEVIEKPQA 108


>M37104-1|AAA51807.1|  108|Homo sapiens ATPase coupling factor 6
           subunit protein.
          Length = 108

 Score = 37.5 bits (83), Expect = 0.022
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -1

Query: 323 AAQKATDPIQQLFLDKIREYKQKARVAKSQMPA 225
           A  K  DPIQ+LF+DKIREYK K + +   + A
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPVDA 63



 Score = 29.9 bits (64), Expect = 4.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 153 DMTAFPSLKFEEPKLDPIDEQAA 85
           DM  FP+ KFE+PK + I++  A
Sbjct: 86  DMNTFPTFKFEDPKFEVIEKPQA 108


>CR456950-1|CAG33231.1|  108|Homo sapiens ATP5J protein.
          Length = 108

 Score = 37.5 bits (83), Expect = 0.022
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -1

Query: 323 AAQKATDPIQQLFLDKIREYKQKARVAKSQMPA 225
           A  K  DPIQ+LF+DKIREYK K + +   + A
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPVDA 63



 Score = 29.9 bits (64), Expect = 4.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 153 DMTAFPSLKFEEPKLDPIDEQAA 85
           DM  FP+ KFE+PK + I++  A
Sbjct: 86  DMNTFPTFKFEDPKFEVIEKPQA 108


>BT007244-1|AAP35908.1|  108|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit F6
           protein.
          Length = 108

 Score = 37.5 bits (83), Expect = 0.022
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -1

Query: 323 AAQKATDPIQQLFLDKIREYKQKARVAKSQMPA 225
           A  K  DPIQ+LF+DKIREYK K + +   + A
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPVDA 63



 Score = 29.9 bits (64), Expect = 4.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 153 DMTAFPSLKFEEPKLDPIDEQAA 85
           DM  FP+ KFE+PK + I++  A
Sbjct: 86  DMNTFPTFKFEDPKFEVIEKPQA 108


>BC066310-1|AAH66310.1|  108|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit F6
           protein.
          Length = 108

 Score = 37.5 bits (83), Expect = 0.022
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -1

Query: 323 AAQKATDPIQQLFLDKIREYKQKARVAKSQMPA 225
           A  K  DPIQ+LF+DKIREYK K + +   + A
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPVDA 63


>BC001178-1|AAH01178.1|  108|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit F6
           protein.
          Length = 108

 Score = 37.5 bits (83), Expect = 0.022
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -1

Query: 323 AAQKATDPIQQLFLDKIREYKQKARVAKSQMPA 225
           A  K  DPIQ+LF+DKIREYK K + +   + A
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPVDA 63



 Score = 29.9 bits (64), Expect = 4.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 153 DMTAFPSLKFEEPKLDPIDEQAA 85
           DM  FP+ KFE+PK + I++  A
Sbjct: 86  DMNTFPTFKFEDPKFEVIEKPQA 108


>AY544129-1|AAT11160.1|  108|Homo sapiens proliferation-inducing
           protein 36 protein.
          Length = 108

 Score = 37.5 bits (83), Expect = 0.022
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -1

Query: 323 AAQKATDPIQQLFLDKIREYKQKARVAKSQMPA 225
           A  K  DPIQ+LF+DKIREYK K + +   + A
Sbjct: 31  AFNKELDPIQKLFVDKIREYKSKRQTSGGPVDA 63



 Score = 29.9 bits (64), Expect = 4.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 153 DMTAFPSLKFEEPKLDPIDEQAA 85
           DM  FP+ KFE+PK + I++  A
Sbjct: 86  DMNTFPTFKFEDPKFEVIEKPQA 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,164,659
Number of Sequences: 237096
Number of extensions: 1452537
Number of successful extensions: 2005
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2005
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)