Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30815.Seq
(748 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 38 1e-04
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 33 0.002
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.4
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.4
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.4
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.4
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.4
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 21 7.9
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 37.5 bits (83), Expect = 1e-04
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 13/64 (20%)
Frame = -1
Query: 415 PSRLMLPKGTYDGFPFQLFVFVYPY---------EPTPKESEPF----KSVVPDNKPFGY 275
P ++LPKGT G+P LFV + Y T + + F + PD + GY
Sbjct: 582 PQHMLLPKGTEAGYPCHLFVMISNYADDRVEQDTSGTCSDGDTFCGIKDKLYPDRRSMGY 641
Query: 274 PFDR 263
PFDR
Sbjct: 642 PFDR 645
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 588 FYELDWFVQKVNPGQSQITRSSTD 517
F ELD F + G + ITR ST+
Sbjct: 523 FIELDRFAVSLKQGTNTITRHSTE 546
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3
Query: 659 RMFLGPKYDENGFPF 615
R+FL P++DE G P+
Sbjct: 500 RIFLAPQFDERGNPW 514
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 33.1 bits (72), Expect = 0.002
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Frame = -1
Query: 415 PSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEP-------------FKSVVPDNKPFGY 275
P +++PKGT +G QLFV + Y+ + + PD + GY
Sbjct: 583 PQHMLIPKGTPEGMKSQLFVMISNYDDDKIDQSTEGVCNDAGSYCGIKDKLYPDRRSMGY 642
Query: 274 PFDR 263
PFDR
Sbjct: 643 PFDR 646
Score = 25.0 bits (52), Expect = 0.64
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 588 FYELDWFVQKVNPGQSQITRSST 520
F ELD F + GQ+ ITR+S+
Sbjct: 524 FIELDKFTVNLKQGQNTITRASS 546
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 659 RMFLGPKYDENGFPF 615
R+FL PK DE G P+
Sbjct: 501 RIFLAPKTDERGNPW 515
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/33 (27%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 631 SSYLGPRNILDDGVSGQHQILIIRF-VTVNRLV 726
++ LGP N+L+ V+ + + L ++F +T+ +++
Sbjct: 9 NNLLGPYNVLERPVANESEPLEVKFGLTLQQII 41
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/33 (27%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 631 SSYLGPRNILDDGVSGQHQILIIRF-VTVNRLV 726
++ LGP N+L+ V+ + + L ++F +T+ +++
Sbjct: 9 NNLLGPYNVLERPVANESEPLEVKFGLTLQQII 41
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/33 (27%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 631 SSYLGPRNILDDGVSGQHQILIIRF-VTVNRLV 726
++ LGP N+L+ V+ + + L ++F +T+ +++
Sbjct: 9 NNLLGPYNVLERPVANESEPLEVKFGLTLQQII 41
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/33 (27%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 631 SSYLGPRNILDDGVSGQHQILIIRF-VTVNRLV 726
++ LGP N+L+ V+ + + L ++F +T+ +++
Sbjct: 9 NNLLGPYNVLERPVANESEPLEVKFGLTLQQII 41
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/33 (27%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 631 SSYLGPRNILDDGVSGQHQILIIRF-VTVNRLV 726
++ LGP N+L+ V+ + + L ++F +T+ +++
Sbjct: 9 NNLLGPYNVLERPVANESEPLEVKFGLTLQQII 41
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -3
Query: 674 LTPSSRMFLGPKYDENGFPFSPRR*LDETSTSLT 573
+ P S + P+Y + + P R DE +LT
Sbjct: 390 MVPISGLHYDPEYYPDPEKYDPERFSDENKKNLT 423
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,848
Number of Sequences: 336
Number of extensions: 3447
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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