Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30807.Seq
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 140 1e-32
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 134 1e-30
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 120 1e-26
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 120 1e-26
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 118 1e-25
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 117 2e-25
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 57 1e-16
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 82 6e-15
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 77 2e-13
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 71 1e-11
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 68 1e-10
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 65 1e-09
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 62 5e-09
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 56 4e-07
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 51 1e-05
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 49 7e-05
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 44 0.001
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 42 0.006
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 36 0.38
UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas d... 36 0.51
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 0.88
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.88
UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky homo... 35 1.2
UniRef50_Q9YBZ9 Cluster: Putative uncharacterized protein; n=1; ... 33 2.7
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 33 4.7
UniRef50_Q9UKA1 Cluster: F-box/LRR-repeat protein 5; n=38; Eutel... 32 6.2
UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:... 32 8.2
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 140 bits (340), Expect = 1e-32
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVRMNVL+D LKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 287 IVVNLTGRLNK 255
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 80.2 bits (189), Expect = 2e-14
Identities = 36/46 (78%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 134 bits (324), Expect = 1e-30
Identities = 64/71 (90%), Positives = 67/71 (94%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVRMNVL+D LKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 287 IVVNLTGRLNK 255
IVVNLTGRLNK
Sbjct: 184 IVVNLTGRLNK 194
Score = 68.5 bits (160), Expect = 8e-11
Identities = 31/46 (67%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVIS RFDV + D+++W NLLP RQFG++VLTT GI+DHEEARR
Sbjct: 196 GVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARR 241
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 120 bits (290), Expect = 1e-26
Identities = 57/64 (89%), Positives = 61/64 (95%)
Frame = -3
Query: 446 SDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 267
SD LKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 266 RLNK 255
RLNK
Sbjct: 234 RLNK 237
Score = 67.3 bits (157), Expect = 2e-10
Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDHEEAR+
Sbjct: 239 GVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQ 284
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 120 bits (290), Expect = 1e-26
Identities = 56/71 (78%), Positives = 64/71 (90%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 287 IVVNLTGRLNK 255
IVV L GRLNK
Sbjct: 61 IVVELNGRLNK 71
Score = 77.4 bits (182), Expect = 2e-13
Identities = 36/46 (78%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 73 GVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARR 118
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 118 bits (283), Expect = 1e-25
Identities = 61/83 (73%), Positives = 71/83 (85%), Gaps = 4/83 (4%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVR NVL+D LK I+NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 287 IVVNLTGRLNK--VVS--FHLVL 231
+VV LT RLNK V+S FH+ L
Sbjct: 60 MVVYLTDRLNKCGVISPRFHVQL 82
Score = 68.5 bits (160), Expect = 8e-11
Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRF V + D+E+W NLLPS QFG+++LTTS GI D EEARR
Sbjct: 72 GVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARR 117
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 117 bits (281), Expect = 2e-25
Identities = 56/73 (76%), Positives = 62/73 (84%)
Frame = -3
Query: 473 LAMVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 294
+ MV MNVL D LKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 293 GKIVVNLTGRLNK 255
GK+VVNLTGRLNK
Sbjct: 157 GKMVVNLTGRLNK 169
Score = 70.1 bits (164), Expect = 3e-11
Identities = 31/46 (67%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+
Sbjct: 171 GVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQ 216
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 57.2 bits (132), Expect(2) = 1e-16
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -3
Query: 473 LAMVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 336
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 50.8 bits (116), Expect(2) = 1e-16
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = -3
Query: 335 GYIGEFEIVDDHRAGKIVVNLTGRLNK 255
GYI EFE +DDHRAGKIVV L GR+NK
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINK 133
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 82.2 bits (194), Expect = 6e-15
Identities = 38/71 (53%), Positives = 50/71 (70%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
M +N L++ L +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 287 IVVNLTGRLNK 255
I+V L GR+NK
Sbjct: 61 IIVQLLGRINK 71
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = -2
Query: 252 GVISPRFDVPINDIERWTNL----LPSRQFGYLVLTTSGGIMDHEEARR 118
G ISPR+ + N + R + LPS++ G ++++T G+M H + R
Sbjct: 73 GPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIR 121
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 77.0 bits (181), Expect = 2e-13
Identities = 37/71 (52%), Positives = 50/71 (70%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
M ++ L++ L I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 287 IVVNLTGRLNK 255
V L GR+NK
Sbjct: 61 YRVQLLGRINK 71
Score = 49.6 bits (113), Expect = 4e-05
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = -2
Query: 258 QGGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEA 124
+ G I PRF V +++ E+W LP+ +FG L+++TS G+M H+EA
Sbjct: 71 KAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEA 116
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 71.3 bits (167), Expect = 1e-11
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = -3
Query: 452 VLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 273
+L+D L++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 272 TGRLN 258
GR+N
Sbjct: 65 QGRVN 69
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/39 (56%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Frame = -2
Query: 237 RFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEA 124
R DV +IE++T LP+RQ+GY+V+TT GI+DHEEA
Sbjct: 77 RQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEA 115
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 68.1 bits (159), Expect = 1e-10
Identities = 34/71 (47%), Positives = 45/71 (63%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MV ++ L++ L +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 287 IVVNLTGRLNK 255
V L GR+NK
Sbjct: 61 YSVTLVGRINK 71
Score = 48.4 bits (110), Expect = 9e-05
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEAR 121
G I PR+ V ERW LP++ FG L+LTTS G+M EAR
Sbjct: 73 GAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEAR 117
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 64.9 bits (151), Expect = 1e-09
Identities = 28/65 (43%), Positives = 46/65 (70%)
Frame = -3
Query: 449 LSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 270
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 269 GRLNK 255
GRLN+
Sbjct: 65 GRLNR 69
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEE 127
G ISP + V + IE + T LLP+RQFG+++ TS GI+DH+E
Sbjct: 71 GAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKE 113
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = -3
Query: 458 MNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 279
++ LS+ + +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 278 NLTGRLN 258
L+G +N
Sbjct: 63 ELSGNIN 69
Score = 40.3 bits (90), Expect = 0.023
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARR 118
G I PRF + + E + LP+R FG L+++T+ G+M ++AR+
Sbjct: 72 GAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARK 117
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 56.0 bits (129), Expect = 4e-07
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 287 IVVNLTGRLNK 255
V+L ++ K
Sbjct: 61 FSVHLLAKITK 71
Score = 40.3 bits (90), Expect = 0.023
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEA 124
G ISPRF V + W LPS G LV+TT+ G+M H EA
Sbjct: 73 GAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEA 116
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/73 (35%), Positives = 37/73 (50%)
Frame = -3
Query: 473 LAMVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 294
L M + ++ L + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 293 GKIVVNLTGRLNK 255
GK V L G +N+
Sbjct: 76 GKFEVELKGAINE 88
Score = 47.2 bits (107), Expect = 2e-04
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEAR 121
G + PR+ ++ E+W LP+R +G L++TTS G+M H EAR
Sbjct: 90 GAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAR 134
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 48.8 bits (111), Expect = 7e-05
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVI PR V ++IER+ + LP++ FG ++LTT+ GIM H EAR+
Sbjct: 72 GVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARK 117
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 44.4 bits (100), Expect = 0.001
Identities = 18/67 (26%), Positives = 37/67 (55%)
Frame = -3
Query: 455 NVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 276
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R I +
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63
Query: 275 LTGRLNK 255
L+ N+
Sbjct: 64 LSEYFNE 70
Score = 38.3 bits (85), Expect = 0.095
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -2
Query: 258 QGGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEAR 121
+ I PRF V +++E++ LP+ FG L+L+TS G++ + EA+
Sbjct: 70 EANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAK 116
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 42.3 bits (95), Expect = 0.006
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -3
Query: 329 IGEFEIVDDHRAGKIVVNLTGRLNKVVS 246
IG+FE++DDHRAGKIV NL+ ++ +V S
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQVCS 36
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 36.3 bits (80), Expect = 0.38
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -3
Query: 359 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNK 255
F+TV MK G+FEIVD+ G+I V+L G LNK
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNK 34
>UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas
danica|Rep: Ribosomal protein S8 - Ochromonas danica
Length = 128
Score = 35.9 bits (79), Expect = 0.51
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -3
Query: 449 LSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 270
L D L S+ NA K V I+ S++I K+L ++ K G I F D +VNL
Sbjct: 5 LIDFLLSLKNASLAKKDFVKIKE-SRLISKYLPILYKEGIIQSFFKKQDSCNSFYIVNLR 63
Query: 269 GRLNKVVSFHLVLM-FPSTILK 207
NKVV+ + L+ PS I K
Sbjct: 64 HFQNKVVTQDIQLISTPSKIKK 85
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 35.1 bits (77), Expect = 0.88
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -3
Query: 449 LSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 318
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.88
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = -3
Query: 455 NVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 312
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky
homolog-like (mouse) (predicted); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to jerky
homolog-like (mouse) (predicted) - Nasonia vitripennis
Length = 1386
Score = 34.7 bits (76), Expect = 1.2
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = -3
Query: 449 LSDXLKSIHNAEKRGKRQVLIR--PCSKVIVKFL--TVMMKHGYIGEFEIVDDHRAGKIV 282
+++ +K N + R + Q L R P ++VI++ L ++M+K+G + + + DD R K+
Sbjct: 129 VANKIKKDPNPDLRSETQKLTRQLPSARVILERLPDSLMVKNGKLSDNDCQDDSRKRKLS 188
Query: 281 VNLTGRLNKVVSFHLVLMFPSTILKDGLIC 192
+ +N L + +P T+ + +IC
Sbjct: 189 SCYSSDVNACKKSRLDVAYPETLKRIKVIC 218
>UniRef50_Q9YBZ9 Cluster: Putative uncharacterized protein; n=1;
Aeropyrum pernix|Rep: Putative uncharacterized protein -
Aeropyrum pernix
Length = 153
Score = 33.5 bits (73), Expect = 2.7
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = -3
Query: 452 VLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 273
VL D L + + ++R + L K V ++ V + Y+GE I + +I V
Sbjct: 68 VLEDILSKLPSHDRRYLLETLEERVDKNGVLYIRVSKQDAYLGEARIYEGDDVIRIAVGF 127
Query: 272 TGRLNKVVSFHLVLM 228
G K VSF+ L+
Sbjct: 128 QGGRRKAVSFYRELL 142
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 3.6
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -3
Query: 464 VRMN-VLSDXLKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 294
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza
sativa|Rep: Os01g0153200 protein - Oryza sativa subsp.
japonica (Rice)
Length = 1139
Score = 32.7 bits (71), Expect = 4.7
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 2/25 (8%)
Frame = -3
Query: 311 VDDHRAGKIVVNLTGRLNK--VVSF 243
VDDH++G+I++ GRLNK V+SF
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISF 936
>UniRef50_Q9UKA1 Cluster: F-box/LRR-repeat protein 5; n=38;
Euteleostomi|Rep: F-box/LRR-repeat protein 5 - Homo
sapiens (Human)
Length = 691
Score = 32.3 bits (70), Expect = 6.2
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -2
Query: 303 SQSWQDCCKSHRQTKQGGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 151
S SW CC+S R G DV + I R +L S Q G+L +TS
Sbjct: 375 SWSWLGCCQSLRHLDLSG-CEKITDVALEKISRALGILTSHQSGFLKTSTS 424
>UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:
ISTde2, transposase - Treponema denticola
Length = 358
Score = 31.9 bits (69), Expect = 8.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 258 QGGVISPRFDVPINDIERWTNLLPSRQFGY 169
+G IS D+ I +E W N P R FGY
Sbjct: 321 KGADISKYSDIQIKQVENWINNYPRRMFGY 350
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,600,727
Number of Sequences: 1657284
Number of extensions: 6825495
Number of successful extensions: 13617
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 13388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13606
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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