Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30807.Seq
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 140 2e-33
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 140 2e-33
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 140 2e-33
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 140 2e-33
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 140 2e-33
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 140 2e-33
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 140 2e-33
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 139 4e-33
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 106 4e-23
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 40 0.004
BX537957-1|CAD97924.1| 697|Homo sapiens hypothetical protein pr... 32 0.96
BC030656-1|AAH30656.1| 691|Homo sapiens F-box and leucine-rich ... 32 0.96
AK000153-1|BAA90978.1| 636|Homo sapiens protein ( Homo sapiens ... 32 0.96
AF199420-1|AAF09249.1| 690|Homo sapiens F-box protein FBL4 prot... 32 0.96
AF176700-1|AAF03700.1| 694|Homo sapiens F-box protein FBL5 prot... 32 0.96
AF174591-1|AAF04512.1| 535|Homo sapiens F-box protein Fbl5 prot... 32 0.96
AF157323-1|AAF67489.1| 674|Homo sapiens p45SKP2-like protein pr... 32 0.96
AF142481-1|AAF66616.1| 691|Homo sapiens F-box protein FLR1 prot... 32 0.96
AC114744-1|AAY40929.1| 616|Homo sapiens unknown protein. 32 0.96
X97187-1|CAA65825.1| 1704|Homo sapiens ABC-C transporter protein. 29 9.0
U78735-1|AAC50967.1| 1704|Homo sapiens ABC3 protein. 29 9.0
DQ073080-1|AAY57325.1| 1704|Homo sapiens ATP-binding cassette, s... 29 9.0
AB210044-1|BAE06126.1| 1708|Homo sapiens ABCA3 variant protein p... 29 9.0
AB070929-1|BAB86781.1| 1704|Homo sapiens lamellar body membrane ... 29 9.0
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 140 bits (340), Expect = 2e-33
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVRMNVL+D LKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 287 IVVNLTGRLNK 255
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 80.2 bits (189), Expect = 4e-15
Identities = 36/46 (78%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 140 bits (340), Expect = 2e-33
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVRMNVL+D LKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 287 IVVNLTGRLNK 255
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 80.2 bits (189), Expect = 4e-15
Identities = 36/46 (78%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 140 bits (340), Expect = 2e-33
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVRMNVL+D LKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 287 IVVNLTGRLNK 255
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 80.2 bits (189), Expect = 4e-15
Identities = 36/46 (78%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 140 bits (340), Expect = 2e-33
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVRMNVL+D LKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 287 IVVNLTGRLNK 255
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 80.2 bits (189), Expect = 4e-15
Identities = 36/46 (78%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 140 bits (340), Expect = 2e-33
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVRMNVL+D LKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 287 IVVNLTGRLNK 255
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 77.0 bits (181), Expect = 3e-14
Identities = 35/46 (76%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPR DV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 73 GVISPRSDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 140 bits (340), Expect = 2e-33
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVRMNVL+D LKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 287 IVVNLTGRLNK 255
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 80.2 bits (189), Expect = 4e-15
Identities = 36/46 (78%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 140 bits (340), Expect = 2e-33
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVRMNVL+D LKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 287 IVVNLTGRLNK 255
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 80.2 bits (189), Expect = 4e-15
Identities = 36/46 (78%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 139 bits (337), Expect = 4e-33
Identities = 65/71 (91%), Positives = 70/71 (98%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVRMNVL+D LKSI+NAEKRGKRQVLIRPCSKVIV+FLT+MMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTLMMKHGYIGEFEIIDDHRAGK 60
Query: 287 IVVNLTGRLNK 255
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 80.2 bits (189), Expect = 4e-15
Identities = 36/46 (78%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 106 bits (255), Expect = 4e-23
Identities = 54/71 (76%), Positives = 59/71 (83%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 288
MVRMNVL+D LKSI+NAEKRGKR+ L+ LTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRRCLLGRLQSHR-PVLTVMMKHGYIGEFEIIDDHRAGK 59
Query: 287 IVVNLTGRLNK 255
IVVNLTGRLNK
Sbjct: 60 IVVNLTGRLNK 70
Score = 80.2 bits (189), Expect = 4e-15
Identities = 36/46 (78%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -2
Query: 252 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARR 118
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARR
Sbjct: 72 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 117
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 40.3 bits (90), Expect = 0.004
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -3
Query: 467 MVRMNVLSDXLKSIHNAEKRGKRQVLIRPCSKVIVKF 357
MV MNVL+ LKSI+N + RGK QVL R C ++ F
Sbjct: 1 MVHMNVLTIALKSINNVKTRGKHQVLRRLCPVLLSSF 37
>BX537957-1|CAD97924.1| 697|Homo sapiens hypothetical protein
protein.
Length = 697
Score = 32.3 bits (70), Expect = 0.96
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -2
Query: 303 SQSWQDCCKSHRQTKQGGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 151
S SW CC+S R G DV + I R +L S Q G+L +TS
Sbjct: 381 SWSWLGCCQSLRHLDLSG-CEKITDVALEKISRALGILTSHQSGFLKTSTS 430
>BC030656-1|AAH30656.1| 691|Homo sapiens F-box and leucine-rich
repeat protein 5 protein.
Length = 691
Score = 32.3 bits (70), Expect = 0.96
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -2
Query: 303 SQSWQDCCKSHRQTKQGGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 151
S SW CC+S R G DV + I R +L S Q G+L +TS
Sbjct: 375 SWSWLGCCQSLRHLDLSG-CEKITDVALEKISRALGILTSHQSGFLKTSTS 424
>AK000153-1|BAA90978.1| 636|Homo sapiens protein ( Homo sapiens
cDNA FLJ20146 fis, clone COL07877. ).
Length = 636
Score = 32.3 bits (70), Expect = 0.96
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -2
Query: 303 SQSWQDCCKSHRQTKQGGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 151
S SW CC+S R G DV + I R +L S Q G+L +TS
Sbjct: 320 SWSWLGCCQSLRHLDLSG-CEKITDVALEKISRALGILTSHQSGFLKTSTS 369
>AF199420-1|AAF09249.1| 690|Homo sapiens F-box protein FBL4
protein.
Length = 690
Score = 32.3 bits (70), Expect = 0.96
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -2
Query: 303 SQSWQDCCKSHRQTKQGGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 151
S SW CC+S R G DV + I R +L S Q G+L +TS
Sbjct: 374 SWSWLGCCQSLRHLDLSG-CEKITDVALEKISRALGILTSHQSGFLKTSTS 423
>AF176700-1|AAF03700.1| 694|Homo sapiens F-box protein FBL5
protein.
Length = 694
Score = 32.3 bits (70), Expect = 0.96
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -2
Query: 303 SQSWQDCCKSHRQTKQGGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 151
S SW CC+S R G DV + I R +L S Q G+L +TS
Sbjct: 378 SWSWLGCCQSLRHLDLSG-CEKITDVALEKISRALGILTSHQSGFLKTSTS 427
>AF174591-1|AAF04512.1| 535|Homo sapiens F-box protein Fbl5
protein.
Length = 535
Score = 32.3 bits (70), Expect = 0.96
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -2
Query: 303 SQSWQDCCKSHRQTKQGGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 151
S SW CC+S R G DV + I R +L S Q G+L +TS
Sbjct: 219 SWSWLGCCQSLRHLDLSG-CEKITDVALEKISRALGILTSHQSGFLKTSTS 268
>AF157323-1|AAF67489.1| 674|Homo sapiens p45SKP2-like protein
protein.
Length = 674
Score = 32.3 bits (70), Expect = 0.96
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -2
Query: 303 SQSWQDCCKSHRQTKQGGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 151
S SW CC+S R G DV + I R +L S Q G+L +TS
Sbjct: 358 SWSWLGCCQSLRHLDLSG-CEKITDVALEKISRALGILTSHQSGFLKTSTS 407
>AF142481-1|AAF66616.1| 691|Homo sapiens F-box protein FLR1
protein.
Length = 691
Score = 32.3 bits (70), Expect = 0.96
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -2
Query: 303 SQSWQDCCKSHRQTKQGGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 151
S SW CC+S R G DV + I R +L S Q G+L +TS
Sbjct: 375 SWSWLGCCQSLRHLDLSG-CEKITDVALEKISRALGILTSHQSGFLKTSTS 424
>AC114744-1|AAY40929.1| 616|Homo sapiens unknown protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.96
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -2
Query: 303 SQSWQDCCKSHRQTKQGGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 151
S SW CC+S R G DV + I R +L S Q G+L +TS
Sbjct: 375 SWSWLGCCQSLRHLDLSG-CEKITDVALEKISRALGILTSHQSGFLKTSTS 424
>X97187-1|CAA65825.1| 1704|Homo sapiens ABC-C transporter protein.
Length = 1704
Score = 29.1 bits (62), Expect = 9.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -3
Query: 350 VMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKVVSFHLVLMFPSTILKDGLICSPH 183
V + GY +F+ + DH G+ ++ + RL + H+ +T+ GL+ PH
Sbjct: 1454 VRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1507
>U78735-1|AAC50967.1| 1704|Homo sapiens ABC3 protein.
Length = 1704
Score = 29.1 bits (62), Expect = 9.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -3
Query: 350 VMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKVVSFHLVLMFPSTILKDGLICSPH 183
V + GY +F+ + DH G+ ++ + RL + H+ +T+ GL+ PH
Sbjct: 1454 VRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1507
>DQ073080-1|AAY57325.1| 1704|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), member 3 protein.
Length = 1704
Score = 29.1 bits (62), Expect = 9.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -3
Query: 350 VMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKVVSFHLVLMFPSTILKDGLICSPH 183
V + GY +F+ + DH G+ ++ + RL + H+ +T+ GL+ PH
Sbjct: 1454 VRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1507
>AB210044-1|BAE06126.1| 1708|Homo sapiens ABCA3 variant protein
protein.
Length = 1708
Score = 29.1 bits (62), Expect = 9.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -3
Query: 350 VMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKVVSFHLVLMFPSTILKDGLICSPH 183
V + GY +F+ + DH G+ ++ + RL + H+ +T+ GL+ PH
Sbjct: 1458 VRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1511
>AB070929-1|BAB86781.1| 1704|Homo sapiens lamellar body membrane
specific ATP-binding cassette protein protein.
Length = 1704
Score = 29.1 bits (62), Expect = 9.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -3
Query: 350 VMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKVVSFHLVLMFPSTILKDGLICSPH 183
V + GY +F+ + DH G+ ++ + RL + H+ +T+ GL+ PH
Sbjct: 1454 VRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1507
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,172,715
Number of Sequences: 237096
Number of extensions: 1003388
Number of successful extensions: 1401
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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