Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30803.Seq
(501 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 119 4e-26
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 112 4e-24
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 107 2e-22
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 104 1e-21
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 101 9e-21
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 99 5e-20
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 73 4e-12
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 72 8e-12
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 70 3e-11
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 54 4e-11
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 69 6e-11
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 67 2e-10
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 64 1e-09
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 63 4e-09
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 59 5e-08
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 59 5e-08
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 46 4e-04
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 36 0.68
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 35 0.90
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 1.2
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 34 1.6
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 34 2.1
UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular... 33 4.8
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 33 4.8
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 32 6.3
UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellula... 32 8.3
UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2; Aquifex|... 32 8.3
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 119 bits (286), Expect = 4e-26
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRAGK 248
MVRMNVL+DALKSI+NAEKRGKRQVLI PCSKVIV+FLTVMMKHGYIGEF I+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 249 IV 254
IV
Sbjct: 61 IV 62
Score = 118 bits (285), Expect = 6e-26
Identities = 54/68 (79%), Positives = 59/68 (86%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRW-TNLLPSRQFGYLVLTTSGGIMXHEEARRKHLG 430
+NLTGRLNKCGVISPRFDV + D +W NLLPSRQFG++VLTTS GIM HEEARRKH G
Sbjct: 63 VNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTG 122
Query: 431 GKILGFFF 454
GKILGFFF
Sbjct: 123 GKILGFFF 130
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 112 bits (270), Expect = 4e-24
Identities = 54/62 (87%), Positives = 57/62 (91%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRAGK 248
MVRMNVL+DALKSI+NAEKRGKRQVLI PCSKVIV FLTVMMKHGY GEF I+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 249 IV 254
IV
Sbjct: 184 IV 185
Score = 108 bits (259), Expect = 8e-23
Identities = 50/68 (73%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRW-TNLLPSRQFGYLVLTTSGGIMXHEEARRKHLG 430
+NLTGRLNKCGVIS RFDV + D +W NLLP RQFG++VLTT GI+ HEEARRKH G
Sbjct: 186 VNLTGRLNKCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKHTG 245
Query: 431 GKILGFFF 454
GKILGFFF
Sbjct: 246 GKILGFFF 253
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 107 bits (256), Expect = 2e-22
Identities = 48/68 (70%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRWT-NLLPSRQFGYLVLTTSGGIMXHEEARRKHLG 430
+ L GRLNKCGVISPRFDV + + WT LLPSRQFG++VLTTS GIM HEEARRK++G
Sbjct: 63 VELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVG 122
Query: 431 GKILGFFF 454
GK+LGFF+
Sbjct: 123 GKVLGFFY 130
Score = 101 bits (243), Expect = 7e-21
Identities = 47/62 (75%), Positives = 55/62 (88%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRAGK 248
MVR++VL+D LKS++NAEKRGKRQV+I P SKVI+KFL VM KHGYIGEF VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 249 IV 254
IV
Sbjct: 61 IV 62
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 104 bits (250), Expect = 1e-21
Identities = 47/67 (70%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRW-TNLLPSRQFGYLVLTTSGGIMXHEEARRKHLG 430
+NLTGRLNKCGVISPRFDV + D +W NLLP+RQFG++VLTT GIM EE R+KH G
Sbjct: 161 VNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQKHTG 220
Query: 431 GKILGFF 451
G+ILGFF
Sbjct: 221 GEILGFF 227
Score = 95.5 bits (227), Expect = 6e-19
Identities = 46/64 (71%), Positives = 52/64 (81%)
Frame = +3
Query: 63 LAMVRMNVLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRA 242
+ MV MNVL DALKS ++AEK GKRQ I CSK IV+FLTVMMKHGYI EF I+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 243 GKIV 254
GK+V
Sbjct: 157 GKMV 160
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 101 bits (242), Expect = 9e-21
Identities = 48/62 (77%), Positives = 56/62 (90%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRAGK 248
MVR NVL+DALK I+NA+KRGKRQVL+ PCS+VI++FLTV MKHGYIGEF I DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 249 IV 254
+V
Sbjct: 60 MV 61
Score = 101 bits (242), Expect = 9e-21
Identities = 47/66 (71%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = +2
Query: 260 LTGRLNKCGVISPRFDVPINDXXRW-TNLLPSRQFGYLVLTTSGGIMXHEEARRKHLGGK 436
LT RLNKCGVISPRF V + D +W NLLPS QFG+++LTTS GI EEARRKH GGK
Sbjct: 64 LTDRLNKCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKHTGGK 123
Query: 437 ILGFFF 454
ILGFFF
Sbjct: 124 ILGFFF 129
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 99.1 bits (236), Expect = 5e-20
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 90 SDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRAGKIV 254
SDALKSI+NAEKRGKRQVLI CSKVIV+FL+VMMKHGYIGEF I+DDH AGKIV
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIV 228
Score = 89.4 bits (212), Expect = 4e-17
Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRW-TNLLPSRQFGYLVLTTSGGIMXHEEARRKHLG 430
+NLTGRLNKCGVI+ RFDV D +W NL PS QFG++VLTTS GIM HEEAR+KH G
Sbjct: 229 VNLTGRLNKCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTG 288
Query: 431 GK 436
+
Sbjct: 289 SR 290
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 72.9 bits (171), Expect = 4e-12
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +2
Query: 236 QSWQDCLNLTGRLNKCGVISPRFDVPINDXXRW-TNLLPSRQFGYLVLTTSGGIMXHEEA 412
+S + ++L GRLN+CG ISP + V + + T LLP+RQFG+++ TS GI+ H+E
Sbjct: 55 RSGKSIIDLNGRLNRCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKEC 114
Query: 413 RRKHLGGKILGFFF 454
+++GGKILG+F+
Sbjct: 115 LTENVGGKILGYFY 128
Score = 48.8 bits (111), Expect = 7e-05
Identities = 22/56 (39%), Positives = 37/56 (66%)
Frame = +3
Query: 87 LSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRAGKIV 254
L++ K+I+NA + GKRQ+L+ ++ + FL M++HGYI F + D R+GK +
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSI 60
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 71.7 bits (168), Expect = 8e-12
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRWTN-LLPSRQFGYLVLTTSGGIMXHEEARRKHLG 430
+ L GR+NKCG I PR+ V RW LP++ FG L+LTTS G+M EAR K +G
Sbjct: 63 VTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIG 122
Query: 431 GKILGFFF 454
G++L + +
Sbjct: 123 GQLLAYVY 130
Score = 54.0 bits (124), Expect = 2e-06
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRAG 245
MV ++ L++AL +I NAE GK ++ P SK I L VM GYIG+F +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAG 59
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 69.7 bits (163), Expect = 3e-11
Identities = 30/68 (44%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRWTN-LLPSRQFGYLVLTTSGGIMXHEEARRKHLG 430
++L GR+N C ++ R DV + ++T LP+RQ+GY+V+TT GI+ HEEA ++++G
Sbjct: 62 VDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVG 121
Query: 431 GKILGFFF 454
G++LGFF+
Sbjct: 122 GQVLGFFY 129
Score = 59.7 bits (138), Expect = 4e-08
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +3
Query: 84 VLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRAGKI 251
+L+DAL++I NAE+RGK V + P S V+ FL +M + GYI F + D HR G+I
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRI 60
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 54.0 bits (124), Expect(2) = 4e-11
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = +3
Query: 63 LAMVRMNVLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKH 200
++ V + + +S++NAEKRGKRQVL+ P SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 35.5 bits (78), Expect(2) = 4e-11
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 201 GYIGEFXIVDDHRAGKIV 254
GYI EF +DDHRAGKIV
Sbjct: 107 GYINEFEFIDDHRAGKIV 124
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 68.9 bits (161), Expect = 6e-11
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRAGK 248
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEF +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 249 IV 254
I+
Sbjct: 61 II 62
Score = 58.4 bits (135), Expect = 8e-08
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRWTNL----LPSRQFGYLVLTTSGGIMXHEEARRK 421
+ L GR+NKCG ISPR+ + N R + LPS++ G ++++T G+M H + R+
Sbjct: 63 VQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIRE 122
Query: 422 HLGGKILGFFF 454
+GG LG+ +
Sbjct: 123 KIGGVTLGYVY 133
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 67.3 bits (157), Expect = 2e-10
Identities = 27/68 (39%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRWTN-LLPSRQFGYLVLTTSGGIMXHEEARRKHLG 430
+ L GR+NK G I PRF V +++ +W LP+ +FG L+++TS G+M H+EA K +G
Sbjct: 63 VQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIG 122
Query: 431 GKILGFFF 454
G+++ + +
Sbjct: 123 GRLIAYVY 130
Score = 64.5 bits (150), Expect = 1e-09
Identities = 31/59 (52%), Positives = 42/59 (71%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRAG 245
M ++ L++AL I N+E+ GKR+V I P SK+I + L VM K+GYIGEF +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAG 59
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 64.5 bits (150), Expect = 1e-09
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRWTN-LLPSRQFGYLVLTTSGGIMXHEEARRKHLG 430
+ L G +N+CG + PR+ ++ +W LP+R +G L++TTS G+M H EAR + +G
Sbjct: 80 VELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIG 139
Query: 431 GKILGFFF 454
G+++ + +
Sbjct: 140 GQVIAYVY 147
Score = 41.9 bits (94), Expect = 0.008
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 63 LAMVRMNVLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRA 242
L M + ++AL + NAE G + P S +I L V+ GY+ F VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 243 GK 248
GK
Sbjct: 76 GK 77
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 62.9 bits (146), Expect = 4e-09
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRW-TNLLPSRQFGYLVLTTSGGIMXHEEARRKHLG 430
+ L+ +N CGVI PR V ++ R+ + LP++ FG ++LTT+ GIM H EAR+ +G
Sbjct: 62 VELSDTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIG 121
Query: 431 GKILGFFF 454
GK+L + +
Sbjct: 122 GKLLAYVY 129
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 59.3 bits (137), Expect = 5e-08
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRWTN-LLPSRQFGYLVLTTSGGIMXHEEARRKHLG 430
++L ++ KCG ISPRF V + W LPS G LV+TT+ G+M H EA + +G
Sbjct: 63 VHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGIG 122
Query: 431 GKILGFFF 454
G ++G+ +
Sbjct: 123 GFLIGYVY 130
Score = 49.2 bits (112), Expect = 5e-05
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +3
Query: 69 MVRMNVLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRAGK 248
M N+L++ +++N E R + ++P SK+ V+ L + K GYIGEF V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 59.3 bits (137), Expect = 5e-08
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRWTN-LLPSRQFGYLVLTTSGGIMXHEEARRKHLG 430
+ L+G +N CG I PRF + + + LP+R FG L+++T+ G+M ++AR++ LG
Sbjct: 62 VELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLG 121
Query: 431 GKILGFFF 454
G +L + +
Sbjct: 122 GVLLAYVY 129
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +3
Query: 78 MNVLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRAGKIV 254
++ LS+A+ +I NAE G+++ I P SK+I L VM +GYI F V++HR GK +
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFI 61
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 46.4 bits (105), Expect = 4e-04
Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 254 LNLTGRLNKCGVISPRFDVPINDXXRWTN-LLPSRQFGYLVLTTSGGIMXHEEARRKHLG 430
+ L+ N+ I PRF V ++ ++ LP+ FG L+L+TS G++ + EA+ + +G
Sbjct: 62 IELSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIG 121
Query: 431 GKILGFFF 454
G ++ + +
Sbjct: 122 GVLIAYVY 129
Score = 45.2 bits (102), Expect = 8e-04
Identities = 19/64 (29%), Positives = 39/64 (60%)
Frame = +3
Query: 81 NVLSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEFXIVDDHRAGKIV*I 260
++++D L + N ++G+ + +P S +I+K + +M + GYI + +VD R GKI+ I
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSR-GKIIEI 62
Query: 261 SQAD 272
++
Sbjct: 63 ELSE 66
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 35.5 bits (78), Expect = 0.68
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 299 RFDVPINDXXRWTNLLPSRQ--FGYLVLTTSGGIMXHEEARRKHLGGKILGFFF 454
R VP + R LP + G +L+T G+M EAR+K LGG+++G F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 35.1 bits (77), Expect = 0.90
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 72 VRMN-VLSDALKSIHNAEKRGKRQVLIWP-CSKVIVKFLTVMMKHGYIGEFXIVDDHRA 242
+RMN ++++ K I +A +GKR ++ S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 1.2
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 87 LSDALKSIHNAEKRGKRQVLIWPCSKVIVKFLTVMMKHGYIGEF 218
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 34.3 bits (75), Expect = 1.6
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 362 GYLVLTTSGGIMXHEEARRKHLGGKILGFFF 454
G ++L+TS GIM EAR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 33.9 bits (74), Expect = 2.1
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 362 GYLVLTTSGGIMXHEEARRKHLGGKIL 442
G ++L+TS GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_P73307 Cluster: 30S ribosomal protein S8; n=9; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechocystis
sp. (strain PCC 6803)
Length = 133
Score = 32.7 bits (71), Expect = 4.8
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 362 GYLVLTTSGGIMXHEEARRKHLGGKILGFFF 454
G +++TS GIM EARR+ +GG+IL + +
Sbjct: 103 GIAIVSTSHGIMTDREARRQGIGGEILCYIW 133
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 32.7 bits (71), Expect = 4.8
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 362 GYLVLTTSGGIMXHEEARRKHLGGKILGFFF 454
G ++L+TS G+M +EARR +GG++L F
Sbjct: 103 GIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 32.3 bits (70), Expect = 6.3
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 207 IGEFXIVDDHRAGKIV 254
IG+F ++DDHRAGKIV
Sbjct: 9 IGKFEVIDDHRAGKIV 24
>UniRef50_Q2JIL4 Cluster: 30S ribosomal protein S8; n=93; cellular
organisms|Rep: 30S ribosomal protein S8 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 136
Score = 31.9 bits (69), Expect = 8.3
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 362 GYLVLTTSGGIMXHEEARRKHLGGKIL 442
G +++TS GIM EAR++ +GG++L
Sbjct: 106 GIAIISTSNGIMTDREARKQGIGGEVL 132
>UniRef50_O67566 Cluster: 30S ribosomal protein S8; n=2;
Aquifex|Rep: 30S ribosomal protein S8 - Aquifex aeolicus
Length = 168
Score = 31.9 bits (69), Expect = 8.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 353 RQFGYLVLTTSGGIMXHEEARRKHLGGKILGF 448
R G +++T G+M EARR GG+++ F
Sbjct: 135 RGLGIAIVSTDAGVMTDHEARRMRKGGEVIAF 166
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,751,027
Number of Sequences: 1657284
Number of extensions: 7100483
Number of successful extensions: 12660
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 12416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12644
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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